Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 AJ011931.1-201ENST00000618749 2492 ntBASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COMMD4Q9H0A8 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 RNA5SP416-201ENST00000516838 111 ntBASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 SNX18-202ENST00000343017 3140 ntBASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
COMMD4Q9H0A8 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 PEG13-201ENST00000631594 5667 ntBASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 AL590627.1-203ENST00000421194 1026 ntBASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 AL591424.1-201ENST00000442569 1213 ntBASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 IGHV3-62-201ENST00000520057 340 ntBASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 AC097359.3-201ENST00000603982 1210 ntBASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 BX640515.1-201ENST00000617215 977 ntBASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 AL513190.1-201ENST00000621254 727 ntBASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.75□□□□□ -0.21
COMMD4Q9H0A8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
COMMD4Q9H0A8 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms