Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 AC243562.1-201ENST00000560672 389 ntBASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
THUMPD3Q9BV44 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 FAM220BP-201ENST00000377689 816 ntBASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 BX842568.4-201ENST00000421222 227 ntBASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 MIR3687-2-201ENST00000577708 61 ntBASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 MIR3687-1-201ENST00000614492 61 ntBASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 AJ011931.1-201ENST00000618749 2492 ntBASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 ELL2P1-201ENST00000413990 1906 ntBASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 ZBED1P1-201ENST00000502364 1930 ntBASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
THUMPD3Q9BV44 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
THUMPD3Q9BV44 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
THUMPD3Q9BV44 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
THUMPD3Q9BV44 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
THUMPD3Q9BV44 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
THUMPD3Q9BV44 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.89□□□□□ -0.03
THUMPD3Q9BV44 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.89□□□□□ -0.03
THUMPD3Q9BV44 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
THUMPD3Q9BV44 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
THUMPD3Q9BV44 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
THUMPD3Q9BV44 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.89□□□□□ -0.03
THUMPD3Q9BV44 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.89□□□□□ -0.03
THUMPD3Q9BV44 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms