Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 AC087499.5-201ENST00000452760 1342 ntBASIC14.48□□□□□ -0.09
TM9SF2Q99805 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF2Q99805 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF2Q99805 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 AC097376.2-205ENST00000610159 5334 ntBASIC14.48□□□□□ -0.09
TM9SF2Q99805 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF2Q99805 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF2Q99805 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF2Q99805 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 AC236430.1-201ENST00000402231 743 ntBASIC14.48□□□□□ -0.09
TM9SF2Q99805 AL035633.1-201ENST00000406139 838 ntBASIC14.48□□□□□ -0.09
TM9SF2Q99805 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 AL079307.3-201ENST00000556114 283 ntBASIC14.48□□□□□ -0.09
TM9SF2Q99805 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 RN7SL204P-201ENST00000582831 262 ntBASIC14.48□□□□□ -0.09
TM9SF2Q99805 LINC02560-201ENST00000596379 459 ntBASIC14.48□□□□□ -0.09
TM9SF2Q99805 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.48□□□□□ -0.09
TM9SF2Q99805 TEX28P1-201ENST00000613479 1221 ntBASIC14.48□□□□□ -0.09
TM9SF2Q99805 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 TEX28P2-201ENST00000617764 1221 ntBASIC14.48□□□□□ -0.09
TM9SF2Q99805 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 AC008761.3-201ENST00000624803 892 ntBASIC14.48□□□□□ -0.09
TM9SF2Q99805 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF2Q99805 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 AC026748.1-201ENST00000624349 3251 ntBASIC14.48□□□□□ -0.09
TM9SF2Q99805 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF2Q99805 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF2Q99805 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF2Q99805 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF2Q99805 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF2Q99805 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF2Q99805 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF2Q99805 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF2Q99805 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.48□□□□□ -0.09
TM9SF2Q99805 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF2Q99805 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TM9SF2Q99805 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 TSSK5P-201ENST00000423978 907 ntBASIC14.47□□□□□ -0.09
TM9SF2Q99805 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 SERBP1P3-201ENST00000459980 809 ntBASIC14.47□□□□□ -0.09
TM9SF2Q99805 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 AL133215.2-201ENST00000609242 977 ntBASIC14.47□□□□□ -0.09
TM9SF2Q99805 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 MYO15B-237ENST00000642007 4893 ntBASIC14.47□□□□□ -0.09
TM9SF2Q99805 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TM9SF2Q99805 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TM9SF2Q99805 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms