Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CGREF1Q99674 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CGREF1Q99674 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.8□□□□□ -0.04
CGREF1Q99674 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CGREF1Q99674 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CGREF1Q99674 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CGREF1Q99674 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.79□□□□□ -0.04
CGREF1Q99674 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CGREF1Q99674 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CGREF1Q99674 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CGREF1Q99674 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CGREF1Q99674 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
CGREF1Q99674 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CGREF1Q99674 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CGREF1Q99674 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.79□□□□□ -0.04
CGREF1Q99674 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CGREF1Q99674 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CGREF1Q99674 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CGREF1Q99674 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.79□□□□□ -0.04
CGREF1Q99674 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.79□□□□□ -0.04
CGREF1Q99674 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CGREF1Q99674 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.79□□□□□ -0.04
CGREF1Q99674 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.79□□□□□ -0.04
CGREF1Q99674 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.79□□□□□ -0.04
CGREF1Q99674 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CGREF1Q99674 AC079140.1-201ENST00000508039 487 ntBASIC14.79□□□□□ -0.04
CGREF1Q99674 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.79□□□□□ -0.04
CGREF1Q99674 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CGREF1Q99674 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CGREF1Q99674 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.79□□□□□ -0.04
CGREF1Q99674 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.79□□□□□ -0.04
CGREF1Q99674 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CGREF1Q99674 AC026120.1-201ENST00000611536 926 ntBASIC14.79□□□□□ -0.04
CGREF1Q99674 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
CGREF1Q99674 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CGREF1Q99674 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CGREF1Q99674 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CGREF1Q99674 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CGREF1Q99674 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CGREF1Q99674 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.79□□□□□ -0.04
CGREF1Q99674 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.79□□□□□ -0.04
CGREF1Q99674 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CGREF1Q99674 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.78□□□□□ -0.04
CGREF1Q99674 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.78□□□□□ -0.04
CGREF1Q99674 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CGREF1Q99674 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.78□□□□□ -0.04
CGREF1Q99674 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 ZNF259P1-201ENST00000407656 1365 ntBASIC14.78□□□□□ -0.04
CGREF1Q99674 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.78□□□□□ -0.04
CGREF1Q99674 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.78□□□□□ -0.04
CGREF1Q99674 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CGREF1Q99674 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CGREF1Q99674 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CGREF1Q99674 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.78□□□□□ -0.04
CGREF1Q99674 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.78□□□□□ -0.04
CGREF1Q99674 AL591424.1-201ENST00000442569 1213 ntBASIC14.78□□□□□ -0.04
CGREF1Q99674 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.78□□□□□ -0.04
CGREF1Q99674 KRT8P48-201ENST00000515599 1220 ntBASIC14.78□□□□□ -0.04
CGREF1Q99674 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.78□□□□□ -0.04
CGREF1Q99674 AC011467.4-201ENST00000594891 528 ntBASIC14.78□□□□□ -0.04
CGREF1Q99674 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.78□□□□□ -0.04
CGREF1Q99674 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CGREF1Q99674 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CGREF1Q99674 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.78□□□□□ -0.04
CGREF1Q99674 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CGREF1Q99674 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CGREF1Q99674 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CGREF1Q99674 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CGREF1Q99674 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CGREF1Q99674 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CGREF1Q99674 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.77□□□□□ -0.04
CGREF1Q99674 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CGREF1Q99674 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CGREF1Q99674 IL9RP2-201ENST00000423948 1312 ntBASIC14.77□□□□□ -0.04
CGREF1Q99674 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.77□□□□□ -0.04
CGREF1Q99674 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CGREF1Q99674 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CGREF1Q99674 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CGREF1Q99674 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms