Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLCC1Q96S66 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
CLCC1Q96S66 AL592424.1-201ENST00000563624 1536 ntBASIC13.18□□□□□ -0.3
CLCC1Q96S66 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.18□□□□□ -0.3
CLCC1Q96S66 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.18□□□□□ -0.3
CLCC1Q96S66 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CLCC1Q96S66 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.18□□□□□ -0.3
CLCC1Q96S66 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CLCC1Q96S66 AC136621.1-201ENST00000624017 2304 ntBASIC13.18□□□□□ -0.3
CLCC1Q96S66 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
CLCC1Q96S66 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
CLCC1Q96S66 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.18□□□□□ -0.3
CLCC1Q96S66 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.18□□□□□ -0.3
CLCC1Q96S66 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CLCC1Q96S66 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.18□□□□□ -0.3
CLCC1Q96S66 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 AC232323.1-201ENST00000540724 2099 ntBASIC13.18□□□□□ -0.3
CLCC1Q96S66 REXO1L5P-201ENST00000622260 2098 ntBASIC13.18□□□□□ -0.3
CLCC1Q96S66 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.18□□□□□ -0.3
CLCC1Q96S66 AC074386.1-202ENST00000463561 864 ntBASIC13.18□□□□□ -0.3
CLCC1Q96S66 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 POLD2P1-201ENST00000511220 997 ntBASIC13.18□□□□□ -0.3
CLCC1Q96S66 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 AL009183.1-201ENST00000603760 355 ntBASIC13.18□□□□□ -0.3
CLCC1Q96S66 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CLCC1Q96S66 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.18□□□□□ -0.3
CLCC1Q96S66 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.18□□□□□ -0.3
CLCC1Q96S66 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.18□□□□□ -0.3
CLCC1Q96S66 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.18□□□□□ -0.3
CLCC1Q96S66 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCC1Q96S66 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.18□□□□□ -0.3
CLCC1Q96S66 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 AL591424.1-201ENST00000442569 1213 ntBASIC13.17□□□□□ -0.3
CLCC1Q96S66 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 AC068137.2-201ENST00000605408 478 ntBASIC13.17□□□□□ -0.3
CLCC1Q96S66 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 FAM197Y3-203ENST00000618346 717 ntBASIC13.17□□□□□ -0.3
CLCC1Q96S66 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCC1Q96S66 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.17□□□□□ -0.3
CLCC1Q96S66 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms