Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 AP001005.1-201ENST00000571755 1248 ntBASIC12.64□□□□□ -0.39
RAB40CQ96S21 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 SPTSSB-204ENST00000617024 1292 ntBASIC12.64□□□□□ -0.39
RAB40CQ96S21 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 AC007064.4-201ENST00000637740 555 ntBASIC12.64□□□□□ -0.39
RAB40CQ96S21 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 AC041040.2-201ENST00000622926 2899 ntBASIC12.64□□□□□ -0.39
RAB40CQ96S21 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 HSPA7-201ENST00000445535 1927 ntBASIC12.63□□□□□ -0.39
RAB40CQ96S21 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 AC092910.1-201ENST00000482027 1129 ntBASIC12.63□□□□□ -0.39
RAB40CQ96S21 AC108751.1-201ENST00000490852 363 ntBASIC12.63□□□□□ -0.39
RAB40CQ96S21 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 AC096734.2-201ENST00000562054 433 ntBASIC12.63□□□□□ -0.39
RAB40CQ96S21 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 AC073389.1-201ENST00000595595 795 ntBASIC12.63□□□□□ -0.39
RAB40CQ96S21 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 AC005840.4-201ENST00000541242 2494 ntBASIC12.63□□□□□ -0.39
RAB40CQ96S21 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB40CQ96S21 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
RAB40CQ96S21 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB40CQ96S21 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB40CQ96S21 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB40CQ96S21 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB40CQ96S21 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB40CQ96S21 AC136759.1-202ENST00000530858 2194 ntBASIC12.62□□□□□ -0.39
RAB40CQ96S21 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB40CQ96S21 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB40CQ96S21 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB40CQ96S21 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB40CQ96S21 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB40CQ96S21 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB40CQ96S21 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB40CQ96S21 AC009078.2-202ENST00000463353 338 ntBASIC12.62□□□□□ -0.39
RAB40CQ96S21 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms