Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
MS4A4EQ96PG1 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.49□□□□□ -0.09
MS4A4EQ96PG1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.49□□□□□ -0.09
MS4A4EQ96PG1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MS4A4EQ96PG1 TNRC18P2-201ENST00000417666 2714 ntBASIC14.49□□□□□ -0.09
MS4A4EQ96PG1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MS4A4EQ96PG1 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MS4A4EQ96PG1 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.49□□□□□ -0.09
MS4A4EQ96PG1 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 WASH3P-207ENST00000560956 1394 ntBASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 AGAP7P-201ENST00000582299 2062 ntBASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 AGAP14-201ENST00000624701 2060 ntBASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 BASP1P1-201ENST00000430708 665 ntBASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 RFPL4AP1-201ENST00000530883 850 ntBASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 AC009407.1-201ENST00000568958 598 ntBASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 AC011467.4-201ENST00000594891 528 ntBASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 AL158212.4-201ENST00000624062 1286 ntBASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.48□□□□□ -0.09
MS4A4EQ96PG1 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 AC126755.1-201ENST00000525846 6405 ntBASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 AL512638.1-201ENST00000457493 794 ntBASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 AC092183.1-201ENST00000469884 875 ntBASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 AC135586.1-201ENST00000539323 574 ntBASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 AC008738.7-201ENST00000609744 511 ntBASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
MS4A4EQ96PG1 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms