Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC3BQ96PB8 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC3BQ96PB8 AL360270.3-201ENST00000609118 1348 ntBASIC15.65■□□□□ 0.1
LRRC3BQ96PB8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC3BQ96PB8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.65■□□□□ 0.1
LRRC3BQ96PB8 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.65■□□□□ 0.1
LRRC3BQ96PB8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.65■□□□□ 0.1
LRRC3BQ96PB8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
LRRC3BQ96PB8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 MIR4683-201ENST00000579659 81 ntBASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 NDUFV2P1-201ENST00000596415 907 ntBASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 AC022748.3-201ENST00000621828 275 ntBASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 AC092850.2-201ENST00000623821 2697 ntBASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 AC020916.1-201ENST00000587762 1774 ntBASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC3BQ96PB8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 INE2-201ENST00000630399 1874 ntBASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 AP005117.1-202ENST00000581724 1908 ntBASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 AL662890.1-201ENST00000396818 632 ntBASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 RPL5P21-201ENST00000404620 815 ntBASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 AL354877.1-201ENST00000424412 413 ntBASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 FTLP10-202ENST00000505798 471 ntBASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 MIR4783-201ENST00000580343 82 ntBASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 AL603764.1-201ENST00000636452 321 ntBASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.63■□□□□ 0.09
LRRC3BQ96PB8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC3BQ96PB8 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms