Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SH3KBP1Q96B97 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SH3KBP1Q96B97 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SH3KBP1Q96B97 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.43■□□□□ 0.06
SH3KBP1Q96B97 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SH3KBP1Q96B97 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SH3KBP1Q96B97 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 MYCLP2-201ENST00000449268 967 ntBASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 AC123567.1-201ENST00000548294 1261 ntBASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 AC008494.3-201ENST00000606615 944 ntBASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
SH3KBP1Q96B97 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 DGCR5-201ENST00000399539 862 ntBASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 RN7SL752P-201ENST00000463779 287 ntBASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 AC004790.1-201ENST00000612686 536 ntBASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SH3KBP1Q96B97 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms