Protein–RNA interactions for Protein: Q96AE4

FUBP1, Far upstream element-binding protein 1, humanhuman

Known RBP Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1Q96AE4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
FUBP1Q96AE4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FUBP1Q96AE4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
FUBP1Q96AE4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.5■□□□□ 0.07
FUBP1Q96AE4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FUBP1Q96AE4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.5■□□□□ 0.07
FUBP1Q96AE4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FUBP1Q96AE4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 AL049840.4-201ENST00000602422 811 ntBASIC15.49■□□□□ 0.07
FUBP1Q96AE4 AC133539.2-201ENST00000604757 467 ntBASIC15.49■□□□□ 0.07
FUBP1Q96AE4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FUBP1Q96AE4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 OR8S1-201ENST00000310194 1080 ntBASIC15.48■□□□□ 0.07
FUBP1Q96AE4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 MSTO2P-201ENST00000314835 1709 ntBASIC15.48■□□□□ 0.07
FUBP1Q96AE4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 INTS4P2-202ENST00000614726 2019 ntBASIC15.48■□□□□ 0.07
FUBP1Q96AE4 AC023824.1-201ENST00000562945 2975 ntBASIC15.48■□□□□ 0.07
FUBP1Q96AE4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FUBP1Q96AE4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
FUBP1Q96AE4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
FUBP1Q96AE4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.47■□□□□ 0.07
FUBP1Q96AE4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.47■□□□□ 0.07
FUBP1Q96AE4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.47■□□□□ 0.07
FUBP1Q96AE4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FUBP1Q96AE4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
FUBP1Q96AE4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FUBP1Q96AE4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.47■□□□□ 0.07
FUBP1Q96AE4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
FUBP1Q96AE4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
FUBP1Q96AE4 AL133267.1-201ENST00000398220 340 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms