Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 AC025048.6-201ENST00000634326 1161 ntBASIC13.96□□□□□ -0.17
CPNE4Q96A23 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CPNE4Q96A23 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CPNE4Q96A23 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CPNE4Q96A23 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CPNE4Q96A23 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CPNE4Q96A23 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
CPNE4Q96A23 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CPNE4Q96A23 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.96□□□□□ -0.18
CPNE4Q96A23 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
CPNE4Q96A23 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.96□□□□□ -0.18
CPNE4Q96A23 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CPNE4Q96A23 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CPNE4Q96A23 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CPNE4Q96A23 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CPNE4Q96A23 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CPNE4Q96A23 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CPNE4Q96A23 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CPNE4Q96A23 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.95□□□□□ -0.18
CPNE4Q96A23 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CPNE4Q96A23 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CPNE4Q96A23 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CPNE4Q96A23 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.95□□□□□ -0.18
CPNE4Q96A23 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CPNE4Q96A23 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.95□□□□□ -0.18
CPNE4Q96A23 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CPNE4Q96A23 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CPNE4Q96A23 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CPNE4Q96A23 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CPNE4Q96A23 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CPNE4Q96A23 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CPNE4Q96A23 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CPNE4Q96A23 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.95□□□□□ -0.18
CPNE4Q96A23 RPL5P21-201ENST00000404620 815 ntBASIC13.95□□□□□ -0.18
CPNE4Q96A23 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.95□□□□□ -0.18
CPNE4Q96A23 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.95□□□□□ -0.18
CPNE4Q96A23 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.95□□□□□ -0.18
CPNE4Q96A23 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.95□□□□□ -0.18
CPNE4Q96A23 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.95□□□□□ -0.18
CPNE4Q96A23 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CPNE4Q96A23 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CPNE4Q96A23 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CPNE4Q96A23 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.95□□□□□ -0.18
CPNE4Q96A23 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CPNE4Q96A23 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.95□□□□□ -0.18
CPNE4Q96A23 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CPNE4Q96A23 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CPNE4Q96A23 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.95□□□□□ -0.18
CPNE4Q96A23 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.94□□□□□ -0.18
CPNE4Q96A23 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 AC105250.1-201ENST00000509378 2057 ntBASIC13.94□□□□□ -0.18
CPNE4Q96A23 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.94□□□□□ -0.18
CPNE4Q96A23 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.94□□□□□ -0.18
CPNE4Q96A23 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CPNE4Q96A23 AP006294.1-201ENST00000415407 339 ntBASIC13.94□□□□□ -0.18
CPNE4Q96A23 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CPNE4Q96A23 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CPNE4Q96A23 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.94□□□□□ -0.18
CPNE4Q96A23 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.94□□□□□ -0.18
CPNE4Q96A23 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.94□□□□□ -0.18
CPNE4Q96A23 AC092552.1-201ENST00000547243 906 ntBASIC13.94□□□□□ -0.18
CPNE4Q96A23 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.94□□□□□ -0.18
CPNE4Q96A23 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.94□□□□□ -0.18
CPNE4Q96A23 BRI3BPP1-201ENST00000594224 787 ntBASIC13.94□□□□□ -0.18
CPNE4Q96A23 AL049840.4-201ENST00000602422 811 ntBASIC13.94□□□□□ -0.18
CPNE4Q96A23 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
CPNE4Q96A23 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CPNE4Q96A23 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CPNE4Q96A23 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CPNE4Q96A23 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.93□□□□□ -0.18
CPNE4Q96A23 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms