Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TMEM54Q969K7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TMEM54Q969K7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.62□□□□□ -0.23
TMEM54Q969K7 REXO1L4P-201ENST00000605109 1937 ntBASIC13.62□□□□□ -0.23
TMEM54Q969K7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
TMEM54Q969K7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 AC236430.1-201ENST00000402231 743 ntBASIC13.62□□□□□ -0.23
TMEM54Q969K7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.62□□□□□ -0.23
TMEM54Q969K7 AC087499.6-201ENST00000411576 835 ntBASIC13.62□□□□□ -0.23
TMEM54Q969K7 AL353779.1-201ENST00000434793 351 ntBASIC13.62□□□□□ -0.23
TMEM54Q969K7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TMEM54Q969K7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.62□□□□□ -0.23
TMEM54Q969K7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.62□□□□□ -0.23
TMEM54Q969K7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.62□□□□□ -0.23
TMEM54Q969K7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.62□□□□□ -0.23
TMEM54Q969K7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.62□□□□□ -0.23
TMEM54Q969K7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.62□□□□□ -0.23
TMEM54Q969K7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.62□□□□□ -0.23
TMEM54Q969K7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.62□□□□□ -0.23
TMEM54Q969K7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TMEM54Q969K7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TMEM54Q969K7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TMEM54Q969K7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TMEM54Q969K7 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TMEM54Q969K7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TMEM54Q969K7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 AC068587.6-202ENST00000641839 5619 ntBASIC13.61□□□□□ -0.23
TMEM54Q969K7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 AL138799.1-201ENST00000448213 1675 ntBASIC13.61□□□□□ -0.23
TMEM54Q969K7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 AC123567.1-201ENST00000548294 1261 ntBASIC13.61□□□□□ -0.23
TMEM54Q969K7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 MIR4745-201ENST00000577608 62 ntBASIC13.61□□□□□ -0.23
TMEM54Q969K7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 CHCHD2P3-201ENST00000603038 451 ntBASIC13.61□□□□□ -0.23
TMEM54Q969K7 AC093813.1-201ENST00000605066 256 ntBASIC13.61□□□□□ -0.23
TMEM54Q969K7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.61□□□□□ -0.23
TMEM54Q969K7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.61□□□□□ -0.23
TMEM54Q969K7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TMEM54Q969K7 AC007787.1-201ENST00000588095 1583 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms