Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RDH11Q8TC12 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RDH11Q8TC12 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RDH11Q8TC12 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.28■□□□□ 0.04
RDH11Q8TC12 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RDH11Q8TC12 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RDH11Q8TC12 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RDH11Q8TC12 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RDH11Q8TC12 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.28■□□□□ 0.04
RDH11Q8TC12 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RDH11Q8TC12 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RDH11Q8TC12 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RDH11Q8TC12 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RDH11Q8TC12 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RDH11Q8TC12 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RDH11Q8TC12 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RDH11Q8TC12 AC104457.1-201ENST00000401024 814 ntBASIC15.28■□□□□ 0.04
RDH11Q8TC12 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.28■□□□□ 0.04
RDH11Q8TC12 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.28■□□□□ 0.04
RDH11Q8TC12 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.28■□□□□ 0.04
RDH11Q8TC12 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.28■□□□□ 0.04
RDH11Q8TC12 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.28■□□□□ 0.04
RDH11Q8TC12 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.28■□□□□ 0.04
RDH11Q8TC12 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.28■□□□□ 0.04
RDH11Q8TC12 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
RDH11Q8TC12 AL133215.2-201ENST00000609242 977 ntBASIC15.28■□□□□ 0.04
RDH11Q8TC12 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.28■□□□□ 0.04
RDH11Q8TC12 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RDH11Q8TC12 AL161772.1-201ENST00000610494 4412 ntBASIC15.28■□□□□ 0.04
RDH11Q8TC12 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RDH11Q8TC12 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RDH11Q8TC12 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RDH11Q8TC12 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RDH11Q8TC12 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RDH11Q8TC12 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.28■□□□□ 0.04
RDH11Q8TC12 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RDH11Q8TC12 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RDH11Q8TC12 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RDH11Q8TC12 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RDH11Q8TC12 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.27■□□□□ 0.04
RDH11Q8TC12 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.27■□□□□ 0.04
RDH11Q8TC12 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.27■□□□□ 0.04
RDH11Q8TC12 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RDH11Q8TC12 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.27■□□□□ 0.04
RDH11Q8TC12 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RDH11Q8TC12 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RDH11Q8TC12 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RDH11Q8TC12 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RDH11Q8TC12 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RDH11Q8TC12 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RDH11Q8TC12 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RDH11Q8TC12 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RDH11Q8TC12 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.27■□□□□ 0.04
RDH11Q8TC12 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RDH11Q8TC12 AC007686.3-201ENST00000619017 3487 ntBASIC15.27■□□□□ 0.04
RDH11Q8TC12 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RDH11Q8TC12 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RDH11Q8TC12 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
RDH11Q8TC12 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RDH11Q8TC12 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.27■□□□□ 0.04
RDH11Q8TC12 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.27■□□□□ 0.04
RDH11Q8TC12 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
RDH11Q8TC12 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
RDH11Q8TC12 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.27■□□□□ 0.04
RDH11Q8TC12 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.27■□□□□ 0.04
RDH11Q8TC12 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RDH11Q8TC12 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.27■□□□□ 0.04
RDH11Q8TC12 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RDH11Q8TC12 AC005829.1-201ENST00000570002 483 ntBASIC15.27■□□□□ 0.04
RDH11Q8TC12 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.27■□□□□ 0.04
RDH11Q8TC12 RN7SL828P-201ENST00000607615 303 ntBASIC15.27■□□□□ 0.04
RDH11Q8TC12 GPALPP1-207ENST00000611650 899 ntBASIC15.27■□□□□ 0.04
RDH11Q8TC12 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RDH11Q8TC12 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
RDH11Q8TC12 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.27■□□□□ 0.03
RDH11Q8TC12 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
RDH11Q8TC12 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.27■□□□□ 0.03
RDH11Q8TC12 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RDH11Q8TC12 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RDH11Q8TC12 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.27■□□□□ 0.03
RDH11Q8TC12 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
RDH11Q8TC12 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RDH11Q8TC12 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RDH11Q8TC12 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RDH11Q8TC12 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RDH11Q8TC12 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RDH11Q8TC12 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RDH11Q8TC12 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RDH11Q8TC12 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.27■□□□□ 0.03
RDH11Q8TC12 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RDH11Q8TC12 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.26■□□□□ 0.03
RDH11Q8TC12 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.26■□□□□ 0.03
RDH11Q8TC12 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.26■□□□□ 0.03
RDH11Q8TC12 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RDH11Q8TC12 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RDH11Q8TC12 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RDH11Q8TC12 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RDH11Q8TC12 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RDH11Q8TC12 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RDH11Q8TC12 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms