Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CFAP43Q8NDM7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CFAP43Q8NDM7 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CFAP43Q8NDM7 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC23.65■■□□□ 1.38
CFAP43Q8NDM7 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CFAP43Q8NDM7 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC23.65■■□□□ 1.38
CFAP43Q8NDM7 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC23.65■■□□□ 1.38
CFAP43Q8NDM7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CFAP43Q8NDM7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CFAP43Q8NDM7 KRT8P4-201ENST00000509735 1454 ntBASIC23.65■■□□□ 1.38
CFAP43Q8NDM7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CFAP43Q8NDM7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CFAP43Q8NDM7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CFAP43Q8NDM7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC23.64■■□□□ 1.38
CFAP43Q8NDM7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC23.64■■□□□ 1.38
CFAP43Q8NDM7 IGLV3-15-201ENST00000518356 244 ntBASIC23.64■■□□□ 1.38
CFAP43Q8NDM7 AC005324.6-201ENST00000587972 613 ntBASIC23.64■■□□□ 1.38
CFAP43Q8NDM7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CFAP43Q8NDM7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CFAP43Q8NDM7 AC004899.1-201ENST00000424687 1714 ntBASIC23.64■■□□□ 1.38
CFAP43Q8NDM7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC23.64■■□□□ 1.38
CFAP43Q8NDM7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 RN7SL818P-201ENST00000485099 259 ntBASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 IGHV3-37-201ENST00000518544 340 ntBASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 IRF3-215ENST00000596822 823 ntTSL 3 BASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 AC012044.1-201ENST00000603431 297 ntBASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 RN7SL725P-201ENST00000606439 259 ntBASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 AP001065.2-201ENST00000617205 644 ntBASIC23.64■■□□□ 1.37
CFAP43Q8NDM7 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 AC022616.1-201ENST00000518688 554 ntBASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 AC090164.2-201ENST00000611487 516 ntBASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CFAP43Q8NDM7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 TMBIM7P-203ENST00000641617 1718 ntBASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 RTN3P1-201ENST00000536295 711 ntBASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 AC005357.2-202ENST00000590507 1060 ntBASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 AC051619.9-201ENST00000623237 597 ntBASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 AL805961.1-201ENST00000642026 753 ntBASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 CICP11-201ENST00000434745 2827 ntBASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 AC087481.3-201ENST00000602886 1894 ntBASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC23.62■■□□□ 1.37
CFAP43Q8NDM7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CFAP43Q8NDM7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC23.61■■□□□ 1.37
CFAP43Q8NDM7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC23.61■■□□□ 1.37
CFAP43Q8NDM7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC23.61■■□□□ 1.37
CFAP43Q8NDM7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CFAP43Q8NDM7 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CFAP43Q8NDM7 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC23.61■■□□□ 1.37
CFAP43Q8NDM7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CFAP43Q8NDM7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CFAP43Q8NDM7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CFAP43Q8NDM7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CFAP43Q8NDM7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CFAP43Q8NDM7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CFAP43Q8NDM7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CFAP43Q8NDM7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CFAP43Q8NDM7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms