Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 SAMD11P1-201ENST00000571429 661 ntBASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 LINC00554-201ENST00000564841 3011 ntBASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.67□□□□□ -0.22
ZIC4Q8N9L1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 AC068418.2-201ENST00000577309 3703 ntBASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 SOCS2P1-201ENST00000417727 557 ntBASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 ENPP7P5-201ENST00000541031 1031 ntBASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 AL596325.1-201ENST00000563991 1082 ntBASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 AC027307.3-201ENST00000594262 1100 ntBASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 AL033527.5-201ENST00000641382 801 ntBASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 AP000845.1-201ENST00000581677 2131 ntBASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
ZIC4Q8N9L1 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 REXO1L4P-201ENST00000605109 1937 ntBASIC13.65□□□□□ -0.22
ZIC4Q8N9L1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms