Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 FAM8A3P-201ENST00000427218 844 ntBASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 AC093214.1-201ENST00000511688 1107 ntBASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 AC015910.1-201ENST00000579400 975 ntBASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 CICP11-201ENST00000434745 2827 ntBASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCDC116Q8IYX3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 MIR600HG-201ENST00000449175 5984 ntBASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 AC022144.1-201ENST00000602255 1580 ntBASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 AL133267.1-201ENST00000398220 340 ntBASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 RPL5P21-201ENST00000404620 815 ntBASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 BASP1P1-201ENST00000430708 665 ntBASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 AC114501.2-201ENST00000439631 535 ntBASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 AC005498.2-205ENST00000593218 784 ntBASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCDC116Q8IYX3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCDC116Q8IYX3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms