Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
C9orf40Q8IXQ3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 AC092384.3-202ENST00000564646 2873 ntBASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 AC063926.2-201ENST00000623766 1308 ntBASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 MSTO2P-201ENST00000314835 1709 ntBASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 ACTG1P3-201ENST00000431775 1114 ntBASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 TDH-203ENST00000531764 1110 ntBASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf40Q8IXQ3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 AC008735.3-201ENST00000596646 500 ntBASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 AL109954.1-202ENST00000564051 2148 ntBASIC14.24□□□□□ -0.13
C9orf40Q8IXQ3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms