Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 AP000845.1-201ENST00000581677 2131 ntBASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC83Q8IWF9 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 ACE3P-201ENST00000423435 1973 ntBASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 FAM45BP-202ENST00000592932 1624 ntBASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 RPL13P2-201ENST00000440687 659 ntBASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 HLA-V-204ENST00000476601 1289 ntBASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 AC010336.2-201ENST00000564226 506 ntBASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 AL359258.3-201ENST00000622910 2331 ntBASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC83Q8IWF9 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 REXO1L2P-201ENST00000425429 2069 ntBASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 WASH3P-207ENST00000560956 1394 ntBASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 AL109936.8-201ENST00000641772 604 ntBASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 SNX18-202ENST00000343017 3140 ntBASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC83Q8IWF9 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms