Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 SPDYE12P-201ENST00000618416 771 ntBASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 AL033527.5-202ENST00000641632 1098 ntBASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00346Q8IVM7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
LINC00346Q8IVM7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
LINC00346Q8IVM7 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.77□□□□□ -0.2
LINC00346Q8IVM7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 HLA-J-203ENST00000494367 1087 ntBASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 SLED1-202ENST00000512051 380 ntBASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 AL691403.2-201ENST00000618460 490 ntBASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
LINC00346Q8IVM7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 CNN2P2-201ENST00000443536 909 ntBASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 CNN2P3-201ENST00000450201 906 ntBASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 AC125807.1-201ENST00000483097 614 ntBASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00346Q8IVM7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms