Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
RTTNQ86VV8 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTTNQ86VV8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTTNQ86VV8 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTTNQ86VV8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTTNQ86VV8 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.77□□□□□ -0.21
RTTNQ86VV8 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 AC009407.1-201ENST00000568958 598 ntBASIC13.76□□□□□ -0.21
RTTNQ86VV8 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 AL158211.3-201ENST00000607385 239 ntBASIC13.76□□□□□ -0.21
RTTNQ86VV8 AL844908.2-201ENST00000609461 460 ntBASIC13.76□□□□□ -0.21
RTTNQ86VV8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 MST1L-201ENST00000442552 2185 ntBASIC13.76□□□□□ -0.21
RTTNQ86VV8 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTTNQ86VV8 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
RTTNQ86VV8 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RTTNQ86VV8 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.75□□□□□ -0.21
RTTNQ86VV8 Z97205.2-201ENST00000564697 1639 ntBASIC13.75□□□□□ -0.21
RTTNQ86VV8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RTTNQ86VV8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
RTTNQ86VV8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RTTNQ86VV8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RTTNQ86VV8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RTTNQ86VV8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RTTNQ86VV8 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.75□□□□□ -0.21
RTTNQ86VV8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.75□□□□□ -0.21
RTTNQ86VV8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.75□□□□□ -0.21
RTTNQ86VV8 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.75□□□□□ -0.21
RTTNQ86VV8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RTTNQ86VV8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RTTNQ86VV8 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.75□□□□□ -0.21
RTTNQ86VV8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.75□□□□□ -0.21
RTTNQ86VV8 AC106886.1-201ENST00000568660 600 ntBASIC13.75□□□□□ -0.21
RTTNQ86VV8 TP53TG3HP-202ENST00000569755 579 ntBASIC13.75□□□□□ -0.21
RTTNQ86VV8 MIR6787-201ENST00000616675 61 ntBASIC13.75□□□□□ -0.21
RTTNQ86VV8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.75□□□□□ -0.21
RTTNQ86VV8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
RTTNQ86VV8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RTTNQ86VV8 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.75□□□□□ -0.21
RTTNQ86VV8 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.75□□□□□ -0.21
RTTNQ86VV8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms