Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 HAUS4P1-201ENST00000406739 1145 ntBASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 AC004890.2-204ENST00000481968 304 ntBASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 AC004233.3-201ENST00000607794 1269 ntBASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHMP1BQ7LBR1 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 AC073347.1-201ENST00000421633 2643 ntBASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 AL080243.2-201ENST00000418783 582 ntBASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 AL033527.5-202ENST00000641632 1098 ntBASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 CYP4F24P-201ENST00000586049 1580 ntBASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 AL691432.1-201ENST00000596308 1422 ntBASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHMP1BQ7LBR1 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CHMP1BQ7LBR1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms