Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 AC114812.1-204ENST00000449669 728 ntBASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 AC148477.4-201ENST00000613430 1793 ntBASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 AC023310.1-201ENST00000554836 735 ntBASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 RN7SL560P-201ENST00000577943 264 ntBASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 AC138951.2-201ENST00000623455 1161 ntBASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 PCDHA1-201ENST00000378133 2726 ntBASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC62Q6P9F0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCDC62Q6P9F0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms