Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ATPAF1Q5TC12 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 SPDYE7P-202ENST00000420373 878 ntBASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 SPDYE14P-201ENST00000442619 822 ntBASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 LINC00628-201ENST00000628516 1289 ntBASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATPAF1Q5TC12 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 FGD5P1-202ENST00000614866 2498 ntBASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 CICP14-201ENST00000629111 2732 ntBASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 TSEN15P1-201ENST00000423257 515 ntBASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATPAF1Q5TC12 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms