Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VARS2Q5ST30 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARS2Q5ST30 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.39■□□□□ 0.21
VARS2Q5ST30 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARS2Q5ST30 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 ELK2AP-201ENST00000392510 1007 ntBASIC16.38■□□□□ 0.21
VARS2Q5ST30 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 BRWD1P1-201ENST00000401091 371 ntBASIC16.38■□□□□ 0.21
VARS2Q5ST30 NUS1P3-201ENST00000423502 862 ntBASIC16.38■□□□□ 0.21
VARS2Q5ST30 PSMC1P2-201ENST00000423961 1204 ntBASIC16.38■□□□□ 0.21
VARS2Q5ST30 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 AC004066.1-201ENST00000502488 802 ntBASIC16.38■□□□□ 0.21
VARS2Q5ST30 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 AC078819.1-201ENST00000547454 765 ntBASIC16.38■□□□□ 0.21
VARS2Q5ST30 AC012085.1-201ENST00000548270 765 ntBASIC16.38■□□□□ 0.21
VARS2Q5ST30 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.38■□□□□ 0.21
VARS2Q5ST30 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 RN7SL121P-201ENST00000584223 273 ntBASIC16.38■□□□□ 0.21
VARS2Q5ST30 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 AC090950.1-202ENST00000605733 644 ntBASIC16.38■□□□□ 0.21
VARS2Q5ST30 AC138951.2-201ENST00000623455 1161 ntBASIC16.38■□□□□ 0.21
VARS2Q5ST30 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 AC148477.4-201ENST00000613430 1793 ntBASIC16.38■□□□□ 0.21
VARS2Q5ST30 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.38■□□□□ 0.21
VARS2Q5ST30 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARS2Q5ST30 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARS2Q5ST30 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARS2Q5ST30 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARS2Q5ST30 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARS2Q5ST30 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARS2Q5ST30 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 AC006001.1-201ENST00000325130 474 ntBASIC16.37■□□□□ 0.21
VARS2Q5ST30 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARS2Q5ST30 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARS2Q5ST30 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARS2Q5ST30 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARS2Q5ST30 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VARS2Q5ST30 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARS2Q5ST30 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VARS2Q5ST30 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms