Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 KRT8P44-201ENST00000441609 1350 ntBASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RNFT1Q5M7Z0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
RNFT1Q5M7Z0 AL158070.2-201ENST00000623713 1621 ntBASIC13.9□□□□□ -0.19
RNFT1Q5M7Z0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RNFT1Q5M7Z0 AHCYP2-201ENST00000430630 1300 ntBASIC13.9□□□□□ -0.19
RNFT1Q5M7Z0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 MIR326-201ENST00000362220 95 ntBASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 GOLGA2P4-201ENST00000441462 777 ntBASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 ZNF767P-206ENST00000513792 565 ntBASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 MIR4741-201ENST00000579822 90 ntBASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 AC006453.4-201ENST00000636949 1252 ntBASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
RNFT1Q5M7Z0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 AC020907.1-201ENST00000616460 1350 ntBASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 AL139094.1-201ENST00000405549 1188 ntBASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 NUS1P3-201ENST00000423502 862 ntBASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 AC004066.1-201ENST00000502488 802 ntBASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.88□□□□□ -0.19
RNFT1Q5M7Z0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms