Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
EFNB1P98172 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
EFNB1P98172 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.83□□□□□ -0.2
EFNB1P98172 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
EFNB1P98172 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
EFNB1P98172 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
EFNB1P98172 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
EFNB1P98172 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 AL590627.1-203ENST00000421194 1026 ntBASIC13.83□□□□□ -0.2
EFNB1P98172 FAM58DP-201ENST00000428076 619 ntBASIC13.83□□□□□ -0.2
EFNB1P98172 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.83□□□□□ -0.2
EFNB1P98172 MKNK2P1-201ENST00000437526 628 ntBASIC13.83□□□□□ -0.2
EFNB1P98172 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.83□□□□□ -0.2
EFNB1P98172 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.83□□□□□ -0.2
EFNB1P98172 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.83□□□□□ -0.2
EFNB1P98172 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
EFNB1P98172 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.83□□□□□ -0.2
EFNB1P98172 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.83□□□□□ -0.2
EFNB1P98172 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
EFNB1P98172 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
EFNB1P98172 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.83□□□□□ -0.2
EFNB1P98172 AC105339.1-204ENST00000636249 355 ntBASIC13.83□□□□□ -0.2
EFNB1P98172 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
EFNB1P98172 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
EFNB1P98172 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
EFNB1P98172 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
EFNB1P98172 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
EFNB1P98172 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.83□□□□□ -0.2
EFNB1P98172 LILRP1-201ENST00000444199 1370 ntBASIC13.83□□□□□ -0.2
EFNB1P98172 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
EFNB1P98172 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
EFNB1P98172 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.82□□□□□ -0.2
EFNB1P98172 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.82□□□□□ -0.2
EFNB1P98172 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
EFNB1P98172 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.82□□□□□ -0.2
EFNB1P98172 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.82□□□□□ -0.2
EFNB1P98172 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.82□□□□□ -0.2
EFNB1P98172 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
EFNB1P98172 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
EFNB1P98172 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
EFNB1P98172 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.82□□□□□ -0.2
EFNB1P98172 TOMM22P5-201ENST00000416399 439 ntBASIC13.82□□□□□ -0.2
EFNB1P98172 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.82□□□□□ -0.2
EFNB1P98172 RPL13P2-201ENST00000440687 659 ntBASIC13.82□□□□□ -0.2
EFNB1P98172 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.82□□□□□ -0.2
EFNB1P98172 TPT1P11-201ENST00000458482 498 ntBASIC13.82□□□□□ -0.2
EFNB1P98172 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.82□□□□□ -0.2
EFNB1P98172 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.82□□□□□ -0.2
EFNB1P98172 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.82□□□□□ -0.2
EFNB1P98172 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.82□□□□□ -0.2
EFNB1P98172 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
EFNB1P98172 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.82□□□□□ -0.2
EFNB1P98172 AC007967.4-201ENST00000614700 386 ntBASIC13.82□□□□□ -0.2
EFNB1P98172 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.82□□□□□ -0.2
EFNB1P98172 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
EFNB1P98172 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.82□□□□□ -0.2
EFNB1P98172 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
EFNB1P98172 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
EFNB1P98172 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms