Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SKP1P63208 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.75□□□□□ -0.05
SKP1P63208 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.75□□□□□ -0.05
SKP1P63208 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SKP1P63208 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.75□□□□□ -0.05
SKP1P63208 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SKP1P63208 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SKP1P63208 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SKP1P63208 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SKP1P63208 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SKP1P63208 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SKP1P63208 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SKP1P63208 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SKP1P63208 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SKP1P63208 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.74□□□□□ -0.05
SKP1P63208 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.74□□□□□ -0.05
SKP1P63208 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SKP1P63208 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.74□□□□□ -0.05
SKP1P63208 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SKP1P63208 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SKP1P63208 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SKP1P63208 AP006294.1-201ENST00000415407 339 ntBASIC14.74□□□□□ -0.05
SKP1P63208 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.74□□□□□ -0.05
SKP1P63208 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.74□□□□□ -0.05
SKP1P63208 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.74□□□□□ -0.05
SKP1P63208 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
SKP1P63208 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.74□□□□□ -0.05
SKP1P63208 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.74□□□□□ -0.05
SKP1P63208 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
SKP1P63208 BRI3BPP1-201ENST00000594224 787 ntBASIC14.74□□□□□ -0.05
SKP1P63208 AC133539.2-201ENST00000604757 467 ntBASIC14.74□□□□□ -0.05
SKP1P63208 AC093813.1-201ENST00000605066 256 ntBASIC14.74□□□□□ -0.05
SKP1P63208 AC004790.1-201ENST00000612686 536 ntBASIC14.74□□□□□ -0.05
SKP1P63208 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SKP1P63208 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SKP1P63208 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
SKP1P63208 AC132872.4-202ENST00000622924 2756 ntBASIC14.74□□□□□ -0.05
SKP1P63208 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SKP1P63208 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SKP1P63208 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SKP1P63208 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
SKP1P63208 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SKP1P63208 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SKP1P63208 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
SKP1P63208 TMBIM7P-203ENST00000641617 1718 ntBASIC14.74□□□□□ -0.05
SKP1P63208 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.74□□□□□ -0.05
SKP1P63208 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SKP1P63208 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SKP1P63208 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SKP1P63208 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.74□□□□□ -0.05
SKP1P63208 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SKP1P63208 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.73□□□□□ -0.05
SKP1P63208 INTS4P2-202ENST00000614726 2019 ntBASIC14.73□□□□□ -0.05
SKP1P63208 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.73□□□□□ -0.05
SKP1P63208 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
SKP1P63208 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
SKP1P63208 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SKP1P63208 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.73□□□□□ -0.05
SKP1P63208 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SKP1P63208 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.73□□□□□ -0.05
SKP1P63208 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.73□□□□□ -0.05
SKP1P63208 SOCS2P1-201ENST00000417727 557 ntBASIC14.73□□□□□ -0.05
SKP1P63208 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.73□□□□□ -0.05
SKP1P63208 AL162726.2-201ENST00000438986 1017 ntBASIC14.73□□□□□ -0.05
SKP1P63208 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.73□□□□□ -0.05
SKP1P63208 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.73□□□□□ -0.05
SKP1P63208 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.73□□□□□ -0.05
SKP1P63208 AC092552.1-201ENST00000547243 906 ntBASIC14.73□□□□□ -0.05
SKP1P63208 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.73□□□□□ -0.05
SKP1P63208 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.73□□□□□ -0.05
SKP1P63208 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 AC007950.2-201ENST00000615045 2347 ntBASIC14.73□□□□□ -0.05
SKP1P63208 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.73□□□□□ -0.05
SKP1P63208 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.73□□□□□ -0.05
SKP1P63208 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SKP1P63208 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.73□□□□□ -0.05
SKP1P63208 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SKP1P63208 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms