Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
RPL39P62891 AL928921.2-201ENST00000641325 2442 ntBASIC11.03□□□□□ -0.64
RPL39P62891 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.03□□□□□ -0.64
RPL39P62891 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
RPL39P62891 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RPL39P62891 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.02□□□□□ -0.64
RPL39P62891 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
RPL39P62891 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RPL39P62891 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
RPL39P62891 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RPL39P62891 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC11.02□□□□□ -0.64
RPL39P62891 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
RPL39P62891 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
RPL39P62891 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
RPL39P62891 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.02□□□□□ -0.64
RPL39P62891 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RPL39P62891 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC11.02□□□□□ -0.64
RPL39P62891 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.02□□□□□ -0.65
RPL39P62891 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
RPL39P62891 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC11.02□□□□□ -0.65
RPL39P62891 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
RPL39P62891 IGLL3P-201ENST00000412472 434 ntBASIC11.02□□□□□ -0.65
RPL39P62891 FALEC-201ENST00000416894 566 ntTSL 3 BASIC11.02□□□□□ -0.65
RPL39P62891 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC11.02□□□□□ -0.65
RPL39P62891 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC11.02□□□□□ -0.65
RPL39P62891 HNRNPDP1-201ENST00000439535 754 ntBASIC11.02□□□□□ -0.65
RPL39P62891 HCG4P8-203ENST00000443049 980 ntBASIC11.02□□□□□ -0.65
RPL39P62891 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
RPL39P62891 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.02□□□□□ -0.65
RPL39P62891 RMI2-205ENST00000576027 818 ntTSL 2 BASIC11.02□□□□□ -0.65
RPL39P62891 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC11.02□□□□□ -0.65
RPL39P62891 PRR29-207ENST00000580752 458 ntTSL 3 BASIC11.02□□□□□ -0.65
RPL39P62891 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.02□□□□□ -0.65
RPL39P62891 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC11.02□□□□□ -0.65
RPL39P62891 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
RPL39P62891 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.02□□□□□ -0.65
RPL39P62891 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
RPL39P62891 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
RPL39P62891 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.02□□□□□ -0.65
RPL39P62891 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC11.02□□□□□ -0.65
RPL39P62891 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.02□□□□□ -0.65
RPL39P62891 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.02□□□□□ -0.65
RPL39P62891 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RPL39P62891 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
RPL39P62891 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.01□□□□□ -0.65
RPL39P62891 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
RPL39P62891 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.01□□□□□ -0.65
RPL39P62891 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.01□□□□□ -0.65
RPL39P62891 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC11.01□□□□□ -0.65
RPL39P62891 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.01□□□□□ -0.65
RPL39P62891 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.01□□□□□ -0.65
RPL39P62891 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
RPL39P62891 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
RPL39P62891 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.01□□□□□ -0.65
RPL39P62891 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC11.01□□□□□ -0.65
RPL39P62891 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
RPL39P62891 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.01□□□□□ -0.65
RPL39P62891 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 AC004987.2-201ENST00000395959 1148 ntBASIC11.01□□□□□ -0.65
RPL39P62891 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
RPL39P62891 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC11.01□□□□□ -0.65
RPL39P62891 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC11.01□□□□□ -0.65
RPL39P62891 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC11.01□□□□□ -0.65
RPL39P62891 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC11.01□□□□□ -0.65
RPL39P62891 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
RPL39P62891 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RPL39P62891 AC061975.2-201ENST00000581722 295 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms