Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 AC126755.1-201ENST00000525846 6405 ntBASIC17.79■□□□□ 0.44
CHMP4BP1P59074 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP4BP1P59074 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP4BP1P59074 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP4BP1P59074 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 SNX29P1-201ENST00000548357 1007 ntBASIC17.78■□□□□ 0.44
CHMP4BP1P59074 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 RRP7BP-205ENST00000566851 833 ntBASIC17.78■□□□□ 0.44
CHMP4BP1P59074 AC106886.1-201ENST00000568660 600 ntBASIC17.78■□□□□ 0.44
CHMP4BP1P59074 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 AC133552.6-201ENST00000613406 534 ntBASIC17.78■□□□□ 0.44
CHMP4BP1P59074 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CHMP4BP1P59074 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.77■□□□□ 0.44
CHMP4BP1P59074 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 BNIP3P1-202ENST00000550043 1585 ntBASIC17.77■□□□□ 0.44
CHMP4BP1P59074 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHMP4BP1P59074 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP4BP1P59074 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.77■□□□□ 0.43
CHMP4BP1P59074 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP4BP1P59074 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP4BP1P59074 AL592424.1-201ENST00000563624 1536 ntBASIC17.77■□□□□ 0.43
CHMP4BP1P59074 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CHMP4BP1P59074 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CHMP4BP1P59074 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.43
CHMP4BP1P59074 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP4BP1P59074 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CHMP4BP1P59074 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CHMP4BP1P59074 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.43
CHMP4BP1P59074 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHMP4BP1P59074 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 PPT1-215ENST00000641471 2368 ntBASIC17.76■□□□□ 0.43
CHMP4BP1P59074 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHMP4BP1P59074 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms