Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM11AP58511 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.34□□□□□ -0.11
SMIM11AP58511 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM11AP58511 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
SMIM11AP58511 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SMIM11AP58511 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM11AP58511 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM11AP58511 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM11AP58511 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SMIM11AP58511 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM11AP58511 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM11AP58511 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM11AP58511 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM11AP58511 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM11AP58511 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM11AP58511 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM11AP58511 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
SMIM11AP58511 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM11AP58511 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.34□□□□□ -0.11
SMIM11AP58511 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.34□□□□□ -0.11
SMIM11AP58511 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.34□□□□□ -0.11
SMIM11AP58511 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM11AP58511 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.34□□□□□ -0.11
SMIM11AP58511 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.34□□□□□ -0.11
SMIM11AP58511 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.34□□□□□ -0.11
SMIM11AP58511 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
SMIM11AP58511 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM11AP58511 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM11AP58511 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SMIM11AP58511 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.34□□□□□ -0.11
SMIM11AP58511 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM11AP58511 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.34□□□□□ -0.11
SMIM11AP58511 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM11AP58511 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM11AP58511 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM11AP58511 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SMIM11AP58511 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SMIM11AP58511 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM11AP58511 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM11AP58511 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMIM11AP58511 AC007686.3-201ENST00000619017 3487 ntBASIC14.34□□□□□ -0.11
SMIM11AP58511 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM11AP58511 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
SMIM11AP58511 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM11AP58511 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.33□□□□□ -0.11
SMIM11AP58511 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMIM11AP58511 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.33□□□□□ -0.11
SMIM11AP58511 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SMIM11AP58511 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
SMIM11AP58511 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SMIM11AP58511 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM11AP58511 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM11AP58511 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SMIM11AP58511 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.33□□□□□ -0.12
SMIM11AP58511 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.33□□□□□ -0.12
SMIM11AP58511 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.33□□□□□ -0.12
SMIM11AP58511 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM11AP58511 KRT8P48-201ENST00000515599 1220 ntBASIC14.33□□□□□ -0.12
SMIM11AP58511 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 SLC25A39P2-201ENST00000537614 270 ntBASIC14.33□□□□□ -0.12
SMIM11AP58511 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.33□□□□□ -0.12
SMIM11AP58511 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM11AP58511 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 AC140113.2-201ENST00000604370 208 ntBASIC14.33□□□□□ -0.12
SMIM11AP58511 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
SMIM11AP58511 REXO1L2P-201ENST00000425429 2069 ntBASIC14.33□□□□□ -0.12
SMIM11AP58511 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SMIM11AP58511 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
SMIM11AP58511 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.33□□□□□ -0.12
SMIM11AP58511 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SMIM11AP58511 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SMIM11AP58511 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.33□□□□□ -0.12
SMIM11AP58511 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM11AP58511 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SMIM11AP58511 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SMIM11AP58511 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM11AP58511 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SMIM11AP58511 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.32□□□□□ -0.12
SMIM11AP58511 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms