Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATP1B3P54709 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.54□□□□□ -0.24
ATP1B3P54709 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATP1B3P54709 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATP1B3P54709 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
ATP1B3P54709 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATP1B3P54709 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATP1B3P54709 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
ATP1B3P54709 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ATP1B3P54709 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.53□□□□□ -0.24
ATP1B3P54709 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ATP1B3P54709 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.53□□□□□ -0.24
ATP1B3P54709 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.53□□□□□ -0.24
ATP1B3P54709 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.53□□□□□ -0.24
ATP1B3P54709 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ATP1B3P54709 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.53□□□□□ -0.24
ATP1B3P54709 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.53□□□□□ -0.24
ATP1B3P54709 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ATP1B3P54709 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ATP1B3P54709 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ATP1B3P54709 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.53□□□□□ -0.24
ATP1B3P54709 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
ATP1B3P54709 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.53□□□□□ -0.24
ATP1B3P54709 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.53□□□□□ -0.24
ATP1B3P54709 AC022145.2-201ENST00000598203 171 ntBASIC13.53□□□□□ -0.24
ATP1B3P54709 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.53□□□□□ -0.24
ATP1B3P54709 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.53□□□□□ -0.24
ATP1B3P54709 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.53□□□□□ -0.24
ATP1B3P54709 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ATP1B3P54709 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ATP1B3P54709 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATP1B3P54709 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.52□□□□□ -0.24
ATP1B3P54709 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
ATP1B3P54709 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ATP1B3P54709 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ATP1B3P54709 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ATP1B3P54709 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.52□□□□□ -0.24
ATP1B3P54709 AC005912.2-201ENST00000619492 2400 ntBASIC13.52□□□□□ -0.24
ATP1B3P54709 AC005840.4-201ENST00000541242 2494 ntBASIC13.52□□□□□ -0.24
ATP1B3P54709 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ATP1B3P54709 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ATP1B3P54709 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ATP1B3P54709 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ATP1B3P54709 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATP1B3P54709 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATP1B3P54709 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.52□□□□□ -0.25
ATP1B3P54709 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.52□□□□□ -0.25
ATP1B3P54709 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.52□□□□□ -0.25
ATP1B3P54709 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.52□□□□□ -0.25
ATP1B3P54709 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.52□□□□□ -0.25
ATP1B3P54709 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.52□□□□□ -0.25
ATP1B3P54709 HNRNPUP1-201ENST00000554987 333 ntBASIC13.52□□□□□ -0.25
ATP1B3P54709 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
ATP1B3P54709 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
ATP1B3P54709 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.52□□□□□ -0.25
ATP1B3P54709 AC105021.1-202ENST00000570572 669 ntBASIC13.52□□□□□ -0.25
ATP1B3P54709 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATP1B3P54709 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.52□□□□□ -0.25
ATP1B3P54709 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.52□□□□□ -0.25
ATP1B3P54709 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.52□□□□□ -0.25
ATP1B3P54709 AC003101.2-201ENST00000612557 442 ntBASIC13.52□□□□□ -0.25
ATP1B3P54709 AC018529.1-201ENST00000613063 361 ntBASIC13.52□□□□□ -0.25
ATP1B3P54709 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
ATP1B3P54709 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.52□□□□□ -0.25
ATP1B3P54709 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.52□□□□□ -0.25
ATP1B3P54709 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ATP1B3P54709 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms