Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
NKX2-5P52952 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX2-5P52952 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX2-5P52952 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX2-5P52952 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NKX2-5P52952 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 AC145098.2-201ENST00000623593 3026 ntBASIC13.19□□□□□ -0.3
NKX2-5P52952 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
NKX2-5P52952 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NKX2-5P52952 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NKX2-5P52952 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NKX2-5P52952 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 PEG13-201ENST00000631594 5667 ntBASIC13.19□□□□□ -0.3
NKX2-5P52952 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NKX2-5P52952 AC004945.1-201ENST00000416738 983 ntBASIC13.19□□□□□ -0.3
NKX2-5P52952 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX2-5P52952 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 ECEL1P2-202ENST00000465689 757 ntBASIC13.19□□□□□ -0.3
NKX2-5P52952 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX2-5P52952 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX2-5P52952 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.19□□□□□ -0.3
NKX2-5P52952 BX088651.1-201ENST00000540551 451 ntBASIC13.19□□□□□ -0.3
NKX2-5P52952 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX2-5P52952 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NKX2-5P52952 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX2-5P52952 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
NKX2-5P52952 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
NKX2-5P52952 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX2-5P52952 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX2-5P52952 AC092338.2-201ENST00000568827 1415 ntBASIC13.19□□□□□ -0.3
NKX2-5P52952 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
NKX2-5P52952 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.19□□□□□ -0.3
NKX2-5P52952 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NKX2-5P52952 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.19□□□□□ -0.3
NKX2-5P52952 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-5P52952 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-5P52952 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NKX2-5P52952 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-5P52952 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NKX2-5P52952 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-5P52952 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-5P52952 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NKX2-5P52952 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.18□□□□□ -0.3
NKX2-5P52952 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-5P52952 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-5P52952 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 AC018442.1-201ENST00000421439 2061 ntBASIC13.18□□□□□ -0.3
NKX2-5P52952 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-5P52952 SLC25A1P2-201ENST00000430693 912 ntBASIC13.18□□□□□ -0.3
NKX2-5P52952 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.18□□□□□ -0.3
NKX2-5P52952 AP003097.1-201ENST00000530657 1135 ntBASIC13.18□□□□□ -0.3
NKX2-5P52952 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-5P52952 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC13.18□□□□□ -0.3
NKX2-5P52952 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
NKX2-5P52952 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.18□□□□□ -0.3
NKX2-5P52952 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-5P52952 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.18□□□□□ -0.3
NKX2-5P52952 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.18□□□□□ -0.3
NKX2-5P52952 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-5P52952 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms