Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SRP9P49458 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
SRP9P49458 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
SRP9P49458 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.85□□□□□ -0.19
SRP9P49458 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.85□□□□□ -0.19
SRP9P49458 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.85□□□□□ -0.19
SRP9P49458 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 FAM220BP-201ENST00000377689 816 ntBASIC13.85□□□□□ -0.19
SRP9P49458 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SRP9P49458 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.85□□□□□ -0.19
SRP9P49458 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.85□□□□□ -0.19
SRP9P49458 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.85□□□□□ -0.19
SRP9P49458 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.85□□□□□ -0.19
SRP9P49458 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.85□□□□□ -0.19
SRP9P49458 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.85□□□□□ -0.19
SRP9P49458 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.85□□□□□ -0.19
SRP9P49458 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.85□□□□□ -0.19
SRP9P49458 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.85□□□□□ -0.19
SRP9P49458 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.85□□□□□ -0.19
SRP9P49458 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
SRP9P49458 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.85□□□□□ -0.19
SRP9P49458 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.85□□□□□ -0.19
SRP9P49458 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.85□□□□□ -0.19
SRP9P49458 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.85□□□□□ -0.19
SRP9P49458 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SRP9P49458 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SRP9P49458 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 OR2I1P-209ENST00000641730 5365 ntBASIC13.85□□□□□ -0.19
SRP9P49458 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRP9P49458 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.84□□□□□ -0.19
SRP9P49458 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.84□□□□□ -0.19
SRP9P49458 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.84□□□□□ -0.19
SRP9P49458 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.84□□□□□ -0.19
SRP9P49458 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.84□□□□□ -0.19
SRP9P49458 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SRP9P49458 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.84□□□□□ -0.19
SRP9P49458 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 RBPMS2P1-201ENST00000437762 623 ntBASIC13.84□□□□□ -0.19
SRP9P49458 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SRP9P49458 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.84□□□□□ -0.19
SRP9P49458 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.84□□□□□ -0.19
SRP9P49458 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.84□□□□□ -0.19
SRP9P49458 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.84□□□□□ -0.19
SRP9P49458 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.84□□□□□ -0.19
SRP9P49458 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SRP9P49458 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
SRP9P49458 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.84□□□□□ -0.19
SRP9P49458 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.84□□□□□ -0.19
SRP9P49458 PTENP1-202ENST00000532280 3996 ntBASIC13.84□□□□□ -0.19
SRP9P49458 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
SRP9P49458 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRP9P49458 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms