Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.33■□□□□ 0.52
TNNI2P48788 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC18.33■□□□□ 0.52
TNNI2P48788 PRSS30P-206ENST00000641773 873 ntBASIC18.33■□□□□ 0.52
TNNI2P48788 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNNI2P48788 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TNNI2P48788 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TNNI2P48788 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.33■□□□□ 0.52
TNNI2P48788 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TNNI2P48788 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.33■□□□□ 0.52
TNNI2P48788 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNNI2P48788 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.33■□□□□ 0.52
TNNI2P48788 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNNI2P48788 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
TNNI2P48788 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TNNI2P48788 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.33■□□□□ 0.52
TNNI2P48788 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNNI2P48788 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.32■□□□□ 0.52
TNNI2P48788 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TNNI2P48788 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNNI2P48788 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TNNI2P48788 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNNI2P48788 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.32■□□□□ 0.52
TNNI2P48788 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TNNI2P48788 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TNNI2P48788 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TNNI2P48788 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNNI2P48788 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNNI2P48788 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TNNI2P48788 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNNI2P48788 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.32■□□□□ 0.52
TNNI2P48788 AL645937.2-201ENST00000396808 931 ntBASIC18.32■□□□□ 0.52
TNNI2P48788 AC092506.1-202ENST00000401022 528 ntBASIC18.32■□□□□ 0.52
TNNI2P48788 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
TNNI2P48788 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.32■□□□□ 0.52
TNNI2P48788 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.32■□□□□ 0.52
TNNI2P48788 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.32■□□□□ 0.52
TNNI2P48788 PARP8-218ENST00000513738 596 ntTSL 4 BASIC18.32■□□□□ 0.52
TNNI2P48788 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.32■□□□□ 0.52
TNNI2P48788 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.32■□□□□ 0.52
TNNI2P48788 AL096828.3-201ENST00000615354 462 ntBASIC18.32■□□□□ 0.52
TNNI2P48788 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TNNI2P48788 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TNNI2P48788 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNNI2P48788 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNNI2P48788 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNNI2P48788 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TNNI2P48788 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TNNI2P48788 AC148477.4-201ENST00000613430 1793 ntBASIC18.32■□□□□ 0.52
TNNI2P48788 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TNNI2P48788 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNNI2P48788 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNNI2P48788 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.32■□□□□ 0.52
TNNI2P48788 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
TNNI2P48788 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNNI2P48788 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.31■□□□□ 0.52
TNNI2P48788 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNNI2P48788 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNNI2P48788 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNNI2P48788 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNNI2P48788 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TNNI2P48788 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNNI2P48788 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNNI2P48788 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNNI2P48788 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNNI2P48788 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
TNNI2P48788 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNNI2P48788 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNNI2P48788 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TNNI2P48788 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.31■□□□□ 0.52
TNNI2P48788 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.31■□□□□ 0.52
TNNI2P48788 HLA-DPB2-205ENST00000435074 1188 ntBASIC18.31■□□□□ 0.52
TNNI2P48788 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TNNI2P48788 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.31■□□□□ 0.52
TNNI2P48788 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC18.31■□□□□ 0.52
TNNI2P48788 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.31■□□□□ 0.52
TNNI2P48788 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.31■□□□□ 0.52
TNNI2P48788 RHOQP1-201ENST00000555758 579 ntBASIC18.31■□□□□ 0.52
TNNI2P48788 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.31■□□□□ 0.52
TNNI2P48788 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.31■□□□□ 0.52
TNNI2P48788 ENPP7P14-201ENST00000621765 1040 ntBASIC18.31■□□□□ 0.52
TNNI2P48788 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.31■□□□□ 0.52
TNNI2P48788 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TNNI2P48788 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.31■□□□□ 0.52
TNNI2P48788 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNNI2P48788 AC024909.3-201ENST00000611513 2257 ntBASIC18.31■□□□□ 0.52
TNNI2P48788 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.31■□□□□ 0.52
TNNI2P48788 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNNI2P48788 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNNI2P48788 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNNI2P48788 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.31■□□□□ 0.52
TNNI2P48788 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TNNI2P48788 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TNNI2P48788 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TNNI2P48788 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.3■□□□□ 0.52
TNNI2P48788 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNNI2P48788 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TNNI2P48788 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TNNI2P48788 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNNI2P48788 AL391005.1-201ENST00000623953 2435 ntBASIC18.3■□□□□ 0.52
TNNI2P48788 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms