Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.6■□□□□ 0.25
SSR1P43307 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.6■□□□□ 0.25
SSR1P43307 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.6■□□□□ 0.25
SSR1P43307 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.6■□□□□ 0.25
SSR1P43307 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.6■□□□□ 0.25
SSR1P43307 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SSR1P43307 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
SSR1P43307 AC026150.2-201ENST00000564693 1156 ntBASIC16.6■□□□□ 0.25
SSR1P43307 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.6■□□□□ 0.25
SSR1P43307 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SSR1P43307 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR1P43307 C18orf15-201ENST00000623680 2534 ntBASIC16.6■□□□□ 0.25
SSR1P43307 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SSR1P43307 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR1P43307 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.6■□□□□ 0.25
SSR1P43307 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSR1P43307 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSR1P43307 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSR1P43307 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
SSR1P43307 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.59■□□□□ 0.25
SSR1P43307 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SSR1P43307 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.59■□□□□ 0.25
SSR1P43307 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.59■□□□□ 0.25
SSR1P43307 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
SSR1P43307 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.59■□□□□ 0.25
SSR1P43307 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SSR1P43307 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.59■□□□□ 0.25
SSR1P43307 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SSR1P43307 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.59■□□□□ 0.25
SSR1P43307 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.59■□□□□ 0.25
SSR1P43307 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.59■□□□□ 0.25
SSR1P43307 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SSR1P43307 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.59■□□□□ 0.25
SSR1P43307 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.59■□□□□ 0.25
SSR1P43307 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
SSR1P43307 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 AC006486.2-201ENST00000624246 2199 ntBASIC16.59■□□□□ 0.25
SSR1P43307 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.59■□□□□ 0.25
SSR1P43307 CR383656.2-201ENST00000548656 2254 ntBASIC16.59■□□□□ 0.25
SSR1P43307 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC16.59■□□□□ 0.25
SSR1P43307 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSR1P43307 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.58■□□□□ 0.25
SSR1P43307 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSR1P43307 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSR1P43307 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.58■□□□□ 0.25
SSR1P43307 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSR1P43307 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSR1P43307 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSR1P43307 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSR1P43307 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC16.58■□□□□ 0.24
SSR1P43307 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSR1P43307 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SSR1P43307 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.58■□□□□ 0.24
SSR1P43307 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SSR1P43307 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SSR1P43307 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.58■□□□□ 0.24
SSR1P43307 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.58■□□□□ 0.24
SSR1P43307 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SSR1P43307 SPDYE14P-201ENST00000442619 822 ntBASIC16.58■□□□□ 0.24
SSR1P43307 AC023141.5-201ENST00000458585 616 ntBASIC16.58■□□□□ 0.24
SSR1P43307 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.58■□□□□ 0.24
SSR1P43307 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSR1P43307 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.58■□□□□ 0.24
SSR1P43307 SNHG9-202ENST00000564014 471 ntBASIC16.58■□□□□ 0.24
SSR1P43307 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSR1P43307 MIR4453-201ENST00000584019 89 ntBASIC16.58■□□□□ 0.24
SSR1P43307 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSR1P43307 AL596442.2-201ENST00000610240 980 ntBASIC16.58■□□□□ 0.24
SSR1P43307 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSR1P43307 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SSR1P43307 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SSR1P43307 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SSR1P43307 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms