Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL512361.1-201ENST00000554200 418 ntBASIC16.25■□□□□ 0.19
SLC1A1P43005 AC051619.7-201ENST00000568314 623 ntBASIC16.25■□□□□ 0.19
SLC1A1P43005 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
SLC1A1P43005 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A1P43005 AL136317.3-201ENST00000618497 906 ntBASIC16.25■□□□□ 0.19
SLC1A1P43005 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC1A1P43005 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A1P43005 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A1P43005 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC1A1P43005 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A1P43005 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A1P43005 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A1P43005 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A1P43005 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A1P43005 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A1P43005 AC232323.1-201ENST00000540724 2099 ntBASIC16.25■□□□□ 0.19
SLC1A1P43005 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLC1A1P43005 REXO1L5P-201ENST00000622260 2098 ntBASIC16.25■□□□□ 0.19
SLC1A1P43005 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 AL121723.1-201ENST00000445194 1519 ntBASIC16.24■□□□□ 0.19
SLC1A1P43005 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.24■□□□□ 0.19
SLC1A1P43005 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SLC1A1P43005 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC1A1P43005 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
SLC1A1P43005 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SLC1A1P43005 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.24■□□□□ 0.19
SLC1A1P43005 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC1A1P43005 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC1A1P43005 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC1A1P43005 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC1A1P43005 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC1A1P43005 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC1A1P43005 AC109322.1-201ENST00000524499 1264 ntBASIC16.24■□□□□ 0.19
SLC1A1P43005 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC1A1P43005 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.24■□□□□ 0.19
SLC1A1P43005 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SLC1A1P43005 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC1A1P43005 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 AC010336.2-201ENST00000564226 506 ntBASIC16.24■□□□□ 0.19
SLC1A1P43005 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.24■□□□□ 0.19
SLC1A1P43005 LINC01115-203ENST00000606068 577 ntBASIC16.24■□□□□ 0.19
SLC1A1P43005 AL138828.2-201ENST00000615812 383 ntBASIC16.24■□□□□ 0.19
SLC1A1P43005 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.24■□□□□ 0.19
SLC1A1P43005 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
SLC1A1P43005 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.24■□□□□ 0.19
SLC1A1P43005 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.24■□□□□ 0.19
SLC1A1P43005 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SLC1A1P43005 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SLC1A1P43005 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SLC1A1P43005 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.24■□□□□ 0.19
SLC1A1P43005 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A1P43005 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A1P43005 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A1P43005 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.23■□□□□ 0.19
SLC1A1P43005 TUBB3P1-201ENST00000405796 1332 ntBASIC16.23■□□□□ 0.19
SLC1A1P43005 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A1P43005 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A1P43005 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A1P43005 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A1P43005 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A1P43005 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A1P43005 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A1P43005 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A1P43005 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.23■□□□□ 0.19
SLC1A1P43005 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A1P43005 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC1A1P43005 AC015911.4-201ENST00000588022 1070 ntBASIC16.23■□□□□ 0.19
SLC1A1P43005 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A1P43005 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC1A1P43005 AC073592.8-201ENST00000624126 511 ntBASIC16.23■□□□□ 0.19
SLC1A1P43005 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC1A1P43005 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.23■□□□□ 0.19
SLC1A1P43005 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A1P43005 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC1A1P43005 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SLC1A1P43005 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC1A1P43005 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SLC1A1P43005 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC1A1P43005 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC1A1P43005 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms