Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
TNFSF9P41273 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.7■□□□□ 0.26
TNFSF9P41273 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.7■□□□□ 0.26
TNFSF9P41273 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFSF9P41273 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TNFSF9P41273 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TNFSF9P41273 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TNFSF9P41273 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFSF9P41273 AC138035.3-201ENST00000622706 2791 ntBASIC16.7■□□□□ 0.26
TNFSF9P41273 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TNFSF9P41273 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFSF9P41273 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.7■□□□□ 0.26
TNFSF9P41273 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TNFSF9P41273 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF9P41273 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF9P41273 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
TNFSF9P41273 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.69■□□□□ 0.26
TNFSF9P41273 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF9P41273 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.69■□□□□ 0.26
TNFSF9P41273 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.69■□□□□ 0.26
TNFSF9P41273 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.69■□□□□ 0.26
TNFSF9P41273 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.69■□□□□ 0.26
TNFSF9P41273 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TNFSF9P41273 AL162727.3-201ENST00000635661 2787 ntBASIC16.69■□□□□ 0.26
TNFSF9P41273 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF9P41273 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF9P41273 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.69■□□□□ 0.26
TNFSF9P41273 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF9P41273 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.69■□□□□ 0.26
TNFSF9P41273 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF9P41273 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF9P41273 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TNFSF9P41273 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF9P41273 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF9P41273 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF9P41273 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF9P41273 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF9P41273 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
TNFSF9P41273 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TNFSF9P41273 AC104457.1-201ENST00000401024 814 ntBASIC16.69■□□□□ 0.26
TNFSF9P41273 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.69■□□□□ 0.26
TNFSF9P41273 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.69■□□□□ 0.26
TNFSF9P41273 AC012441.1-201ENST00000446669 685 ntBASIC16.69■□□□□ 0.26
TNFSF9P41273 BCRP2-202ENST00000447763 634 ntBASIC16.69■□□□□ 0.26
TNFSF9P41273 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.69■□□□□ 0.26
TNFSF9P41273 AC022137.2-201ENST00000503482 481 ntBASIC16.69■□□□□ 0.26
TNFSF9P41273 BCRP6-201ENST00000510112 632 ntBASIC16.69■□□□□ 0.26
TNFSF9P41273 BCRP7-201ENST00000511549 544 ntBASIC16.69■□□□□ 0.26
TNFSF9P41273 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF9P41273 KRT17P8-201ENST00000540749 863 ntBASIC16.69■□□□□ 0.26
TNFSF9P41273 AC009486.1-201ENST00000569860 813 ntBASIC16.69■□□□□ 0.26
TNFSF9P41273 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.69■□□□□ 0.26
TNFSF9P41273 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.69■□□□□ 0.26
TNFSF9P41273 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.69■□□□□ 0.26
TNFSF9P41273 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.69■□□□□ 0.26
TNFSF9P41273 BTNL10-201ENST00000595971 695 ntBASIC16.69■□□□□ 0.26
TNFSF9P41273 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TNFSF9P41273 AC233724.13-201ENST00000598383 410 ntBASIC16.69■□□□□ 0.26
TNFSF9P41273 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF9P41273 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TNFSF9P41273 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF9P41273 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF9P41273 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF9P41273 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF9P41273 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TNFSF9P41273 AC148477.4-201ENST00000613430 1793 ntBASIC16.69■□□□□ 0.26
TNFSF9P41273 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFSF9P41273 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.69■□□□□ 0.26
TNFSF9P41273 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
TNFSF9P41273 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TNFSF9P41273 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF9P41273 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF9P41273 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF9P41273 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF9P41273 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF9P41273 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF9P41273 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
TNFSF9P41273 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.68■□□□□ 0.26
TNFSF9P41273 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.68■□□□□ 0.26
TNFSF9P41273 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFSF9P41273 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
TNFSF9P41273 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF9P41273 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF9P41273 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF9P41273 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
TNFSF9P41273 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.68■□□□□ 0.26
TNFSF9P41273 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFSF9P41273 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFSF9P41273 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.68■□□□□ 0.26
TNFSF9P41273 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.68■□□□□ 0.26
TNFSF9P41273 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TNFSF9P41273 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.68■□□□□ 0.26
TNFSF9P41273 AL162274.1-201ENST00000617191 1098 ntBASIC16.68■□□□□ 0.26
TNFSF9P41273 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms