Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 AC091951.1-201ENST00000512854 2465 ntBASIC17.5■□□□□ 0.39
PRPHP41219 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRPHP41219 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PRPHP41219 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PRPHP41219 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.5■□□□□ 0.39
PRPHP41219 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.5■□□□□ 0.39
PRPHP41219 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRPHP41219 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRPHP41219 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.5■□□□□ 0.39
PRPHP41219 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PRPHP41219 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.5■□□□□ 0.39
PRPHP41219 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.5■□□□□ 0.39
PRPHP41219 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.5■□□□□ 0.39
PRPHP41219 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.5■□□□□ 0.39
PRPHP41219 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
PRPHP41219 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PRPHP41219 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PRPHP41219 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
PRPHP41219 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.49■□□□□ 0.39
PRPHP41219 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PRPHP41219 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.49■□□□□ 0.39
PRPHP41219 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
PRPHP41219 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.49■□□□□ 0.39
PRPHP41219 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.49■□□□□ 0.39
PRPHP41219 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.49■□□□□ 0.39
PRPHP41219 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PRPHP41219 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.49■□□□□ 0.39
PRPHP41219 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.49■□□□□ 0.39
PRPHP41219 FAM207CP-201ENST00000443486 507 ntBASIC17.49■□□□□ 0.39
PRPHP41219 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.49■□□□□ 0.39
PRPHP41219 FAM86LP-201ENST00000478302 853 ntBASIC17.49■□□□□ 0.39
PRPHP41219 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.49■□□□□ 0.39
PRPHP41219 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.49■□□□□ 0.39
PRPHP41219 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.49■□□□□ 0.39
PRPHP41219 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.49■□□□□ 0.39
PRPHP41219 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.49■□□□□ 0.39
PRPHP41219 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.49■□□□□ 0.39
PRPHP41219 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.49■□□□□ 0.39
PRPHP41219 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.49■□□□□ 0.39
PRPHP41219 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
PRPHP41219 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.49■□□□□ 0.39
PRPHP41219 AL096865.1-201ENST00000606796 927 ntBASIC17.49■□□□□ 0.39
PRPHP41219 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.49■□□□□ 0.39
PRPHP41219 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PRPHP41219 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PRPHP41219 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.49■□□□□ 0.39
PRPHP41219 TCAF2P1-201ENST00000291129 2421 ntBASIC17.49■□□□□ 0.39
PRPHP41219 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PRPHP41219 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PRPHP41219 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.49■□□□□ 0.39
PRPHP41219 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.49■□□□□ 0.39
PRPHP41219 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PRPHP41219 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRPHP41219 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.48■□□□□ 0.39
PRPHP41219 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.48■□□□□ 0.39
PRPHP41219 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.48■□□□□ 0.39
PRPHP41219 TSPY26P-202ENST00000565928 3884 ntBASIC17.48■□□□□ 0.39
PRPHP41219 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRPHP41219 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRPHP41219 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PRPHP41219 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRPHP41219 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PRPHP41219 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRPHP41219 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
PRPHP41219 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRPHP41219 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.48■□□□□ 0.39
PRPHP41219 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRPHP41219 C8orf49-201ENST00000525043 1968 ntBASIC17.48■□□□□ 0.39
PRPHP41219 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRPHP41219 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRPHP41219 AGAP7P-201ENST00000582299 2062 ntBASIC17.48■□□□□ 0.39
PRPHP41219 AGAP14-201ENST00000624701 2060 ntBASIC17.48■□□□□ 0.39
PRPHP41219 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.48■□□□□ 0.39
PRPHP41219 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRPHP41219 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRPHP41219 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PRPHP41219 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms