Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.71□□□□□ -0.37
CEACAM3P40198 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.71□□□□□ -0.37
CEACAM3P40198 AC004840.1-201ENST00000636359 365 ntBASIC12.71□□□□□ -0.37
CEACAM3P40198 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CEACAM3P40198 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CEACAM3P40198 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.71□□□□□ -0.37
CEACAM3P40198 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CEACAM3P40198 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CEACAM3P40198 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CEACAM3P40198 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CEACAM3P40198 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CEACAM3P40198 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CEACAM3P40198 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CEACAM3P40198 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CEACAM3P40198 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
CEACAM3P40198 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
CEACAM3P40198 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CEACAM3P40198 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CEACAM3P40198 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.71□□□□□ -0.38
CEACAM3P40198 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.7□□□□□ -0.38
CEACAM3P40198 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CEACAM3P40198 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CEACAM3P40198 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 AL391825.1-201ENST00000457671 1364 ntBASIC12.7□□□□□ -0.38
CEACAM3P40198 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.7□□□□□ -0.38
CEACAM3P40198 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.7□□□□□ -0.38
CEACAM3P40198 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CEACAM3P40198 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.7□□□□□ -0.38
CEACAM3P40198 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CEACAM3P40198 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.7□□□□□ -0.38
CEACAM3P40198 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.7□□□□□ -0.38
CEACAM3P40198 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CEACAM3P40198 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 AC087499.6-201ENST00000411576 835 ntBASIC12.7□□□□□ -0.38
CEACAM3P40198 MRPS18AP1-201ENST00000414458 589 ntBASIC12.7□□□□□ -0.38
CEACAM3P40198 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 AC074338.1-201ENST00000416825 156 ntBASIC12.7□□□□□ -0.38
CEACAM3P40198 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CEACAM3P40198 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.7□□□□□ -0.38
CEACAM3P40198 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.7□□□□□ -0.38
CEACAM3P40198 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.7□□□□□ -0.38
CEACAM3P40198 RRP7BP-205ENST00000566851 833 ntBASIC12.7□□□□□ -0.38
CEACAM3P40198 AC015910.1-201ENST00000579400 975 ntBASIC12.7□□□□□ -0.38
CEACAM3P40198 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CEACAM3P40198 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.7□□□□□ -0.38
CEACAM3P40198 AF228730.6-201ENST00000641497 218 ntBASIC12.7□□□□□ -0.38
CEACAM3P40198 AC084121.3-201ENST00000641716 218 ntBASIC12.7□□□□□ -0.38
CEACAM3P40198 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CEACAM3P40198 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CEACAM3P40198 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
CEACAM3P40198 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.7□□□□□ -0.38
CEACAM3P40198 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.7□□□□□ -0.38
CEACAM3P40198 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.7□□□□□ -0.38
CEACAM3P40198 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.7□□□□□ -0.38
CEACAM3P40198 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CEACAM3P40198 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.7□□□□□ -0.38
CEACAM3P40198 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CEACAM3P40198 AC092127.1-201ENST00000567093 3455 ntBASIC12.7□□□□□ -0.38
CEACAM3P40198 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.69□□□□□ -0.38
CEACAM3P40198 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CEACAM3P40198 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.69□□□□□ -0.38
CEACAM3P40198 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.69□□□□□ -0.38
CEACAM3P40198 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
CEACAM3P40198 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms