Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.84□□□□□ -0.35
SNCAP37840 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 IGLL3P-201ENST00000412472 434 ntBASIC12.84□□□□□ -0.35
SNCAP37840 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 RHOQP3-201ENST00000437982 621 ntBASIC12.84□□□□□ -0.35
SNCAP37840 AC140658.5-201ENST00000438532 169 ntBASIC12.84□□□□□ -0.35
SNCAP37840 AC079781.3-201ENST00000449110 356 ntBASIC12.84□□□□□ -0.35
SNCAP37840 HCG4B-203ENST00000450128 991 ntBASIC12.84□□□□□ -0.35
SNCAP37840 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SNCAP37840 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.84□□□□□ -0.35
SNCAP37840 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.84□□□□□ -0.35
SNCAP37840 RNA5SP415-201ENST00000517246 115 ntBASIC12.84□□□□□ -0.35
SNCAP37840 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SNCAP37840 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.84□□□□□ -0.35
SNCAP37840 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.84□□□□□ -0.35
SNCAP37840 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
SNCAP37840 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.84□□□□□ -0.35
SNCAP37840 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SNCAP37840 AP001005.1-201ENST00000571755 1248 ntBASIC12.84□□□□□ -0.35
SNCAP37840 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SNCAP37840 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.84□□□□□ -0.35
SNCAP37840 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.84□□□□□ -0.35
SNCAP37840 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SNCAP37840 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SNCAP37840 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.84□□□□□ -0.35
SNCAP37840 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SNCAP37840 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.84□□□□□ -0.35
SNCAP37840 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.84□□□□□ -0.35
SNCAP37840 MBLAC2-202ENST00000514906 1936 ntBASIC12.84□□□□□ -0.35
SNCAP37840 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.84□□□□□ -0.35
SNCAP37840 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SNCAP37840 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SNCAP37840 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.84□□□□□ -0.35
SNCAP37840 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
SNCAP37840 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SNCAP37840 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.35
SNCAP37840 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SNCAP37840 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SNCAP37840 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
SNCAP37840 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SNCAP37840 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.83□□□□□ -0.35
SNCAP37840 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.83□□□□□ -0.36
SNCAP37840 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SNCAP37840 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.83□□□□□ -0.36
SNCAP37840 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.83□□□□□ -0.36
SNCAP37840 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.83□□□□□ -0.36
SNCAP37840 PRYP6-201ENST00000514804 343 ntBASIC12.83□□□□□ -0.36
SNCAP37840 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.83□□□□□ -0.36
SNCAP37840 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.83□□□□□ -0.36
SNCAP37840 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
SNCAP37840 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.83□□□□□ -0.36
SNCAP37840 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SNCAP37840 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.83□□□□□ -0.36
SNCAP37840 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SNCAP37840 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SNCAP37840 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms