Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
USP6P35125 AC090164.2-201ENST00000611487 516 ntBASIC20.53■□□□□ 0.88
USP6P35125 AC079336.7-201ENST00000623428 1078 ntBASIC20.53■□□□□ 0.88
USP6P35125 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
USP6P35125 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP6P35125 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP6P35125 DKFZP434H168-201ENST00000567381 1905 ntBASIC20.52■□□□□ 0.88
USP6P35125 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP6P35125 AC020910.5-201ENST00000623668 1865 ntBASIC20.52■□□□□ 0.88
USP6P35125 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
USP6P35125 AL118508.1-201ENST00000613502 2345 ntBASIC20.52■□□□□ 0.88
USP6P35125 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.52■□□□□ 0.88
USP6P35125 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
USP6P35125 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
USP6P35125 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
USP6P35125 MIR33B-201ENST00000385104 96 ntBASIC20.52■□□□□ 0.87
USP6P35125 PARVG-202ENST00000415224 999 ntTSL 2 BASIC20.52■□□□□ 0.87
USP6P35125 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC20.52■□□□□ 0.87
USP6P35125 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC20.52■□□□□ 0.87
USP6P35125 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
USP6P35125 AC103988.2-201ENST00000561804 725 ntBASIC20.52■□□□□ 0.87
USP6P35125 AL133499.1-201ENST00000596207 608 ntBASIC20.52■□□□□ 0.87
USP6P35125 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC20.52■□□□□ 0.87
USP6P35125 AL805961.1-203ENST00000641078 1258 ntBASIC20.52■□□□□ 0.87
USP6P35125 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
USP6P35125 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP6P35125 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
USP6P35125 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP6P35125 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC20.51■□□□□ 0.87
USP6P35125 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP6P35125 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP6P35125 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC20.51■□□□□ 0.87
USP6P35125 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC20.51■□□□□ 0.87
USP6P35125 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
USP6P35125 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP6P35125 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.51■□□□□ 0.87
USP6P35125 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
USP6P35125 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP6P35125 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC20.51■□□□□ 0.87
USP6P35125 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
USP6P35125 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.51■□□□□ 0.87
USP6P35125 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
USP6P35125 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP6P35125 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC20.51■□□□□ 0.87
USP6P35125 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
USP6P35125 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP6P35125 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP6P35125 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC20.51■□□□□ 0.87
USP6P35125 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
USP6P35125 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP6P35125 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC20.51■□□□□ 0.87
USP6P35125 VDAC1P1-201ENST00000439229 848 ntBASIC20.51■□□□□ 0.87
USP6P35125 AC104073.2-201ENST00000453737 312 ntBASIC20.51■□□□□ 0.87
USP6P35125 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC20.51■□□□□ 0.87
USP6P35125 NAT9-224ENST00000583757 583 ntTSL 3 BASIC20.51■□□□□ 0.87
USP6P35125 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC20.51■□□□□ 0.87
USP6P35125 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP6P35125 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP6P35125 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC20.51■□□□□ 0.87
USP6P35125 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP6P35125 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP6P35125 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP6P35125 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP6P35125 AC012508.2-201ENST00000567613 1472 ntBASIC20.5■□□□□ 0.87
USP6P35125 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
USP6P35125 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
USP6P35125 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP6P35125 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP6P35125 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP6P35125 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP6P35125 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP6P35125 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP6P35125 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP6P35125 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP6P35125 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
USP6P35125 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP6P35125 SERF2-209ENST00000409646 559 ntTSL 4 BASIC20.5■□□□□ 0.87
USP6P35125 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC20.5■□□□□ 0.87
USP6P35125 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC20.5■□□□□ 0.87
USP6P35125 AC100827.2-201ENST00000563214 1194 ntBASIC20.5■□□□□ 0.87
USP6P35125 DUX4L46-201ENST00000566845 751 ntBASIC20.5■□□□□ 0.87
USP6P35125 MIR4722-201ENST00000578292 60 ntBASIC20.5■□□□□ 0.87
USP6P35125 MIR3907-201ENST00000579424 151 ntBASIC20.5■□□□□ 0.87
USP6P35125 RN7SL163P-201ENST00000583100 276 ntBASIC20.5■□□□□ 0.87
USP6P35125 RPS15-202ENST00000585665 467 ntTSL 3 BASIC20.5■□□□□ 0.87
USP6P35125 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC20.5■□□□□ 0.87
USP6P35125 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
USP6P35125 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC20.5■□□□□ 0.87
USP6P35125 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC20.5■□□□□ 0.87
USP6P35125 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP6P35125 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP6P35125 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP6P35125 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP6P35125 AL391005.1-201ENST00000623953 2435 ntBASIC20.5■□□□□ 0.87
USP6P35125 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP6P35125 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP6P35125 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
USP6P35125 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC20.5■□□□□ 0.87
USP6P35125 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
USP6P35125 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms