Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
CKS2P33552 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC11.48□□□□□ -0.57
CKS2P33552 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC11.48□□□□□ -0.57
CKS2P33552 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.48□□□□□ -0.57
CKS2P33552 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.48□□□□□ -0.57
CKS2P33552 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
CKS2P33552 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.48□□□□□ -0.57
CKS2P33552 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
CKS2P33552 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
CKS2P33552 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CKS2P33552 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
CKS2P33552 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
CKS2P33552 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
CKS2P33552 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CKS2P33552 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.47□□□□□ -0.57
CKS2P33552 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.47□□□□□ -0.57
CKS2P33552 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.47□□□□□ -0.57
CKS2P33552 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC11.47□□□□□ -0.57
CKS2P33552 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.47□□□□□ -0.57
CKS2P33552 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.47□□□□□ -0.57
CKS2P33552 HSPA7-201ENST00000445535 1927 ntBASIC11.47□□□□□ -0.57
CKS2P33552 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
CKS2P33552 AL589702.1-201ENST00000641229 1509 ntBASIC11.47□□□□□ -0.57
CKS2P33552 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.47□□□□□ -0.57
CKS2P33552 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
CKS2P33552 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.47□□□□□ -0.57
CKS2P33552 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.47□□□□□ -0.57
CKS2P33552 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
CKS2P33552 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.47□□□□□ -0.57
CKS2P33552 AP002383.4-201ENST00000442518 975 ntBASIC11.47□□□□□ -0.57
CKS2P33552 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC11.47□□□□□ -0.57
CKS2P33552 RPS15P9-201ENST00000494093 319 ntBASIC11.47□□□□□ -0.57
CKS2P33552 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC11.47□□□□□ -0.57
CKS2P33552 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC11.47□□□□□ -0.57
CKS2P33552 MTDHP3-201ENST00000594186 672 ntBASIC11.47□□□□□ -0.57
CKS2P33552 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC11.47□□□□□ -0.57
CKS2P33552 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.47□□□□□ -0.57
CKS2P33552 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC11.47□□□□□ -0.57
CKS2P33552 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
CKS2P33552 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.47□□□□□ -0.57
CKS2P33552 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
CKS2P33552 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.47□□□□□ -0.57
CKS2P33552 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.47□□□□□ -0.57
CKS2P33552 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.47□□□□□ -0.57
CKS2P33552 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.47□□□□□ -0.57
CKS2P33552 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CKS2P33552 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.47□□□□□ -0.57
CKS2P33552 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CKS2P33552 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CKS2P33552 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CKS2P33552 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11.46□□□□□ -0.57
CKS2P33552 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CKS2P33552 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.46□□□□□ -0.57
CKS2P33552 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CKS2P33552 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.46□□□□□ -0.57
CKS2P33552 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.46□□□□□ -0.57
CKS2P33552 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
CKS2P33552 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
CKS2P33552 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CKS2P33552 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CKS2P33552 AL928921.2-201ENST00000641325 2442 ntBASIC11.46□□□□□ -0.57
CKS2P33552 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
CKS2P33552 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CKS2P33552 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms