Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.82□□□□□ -0.2
HOXC12P31275 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC12P31275 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC12P31275 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC12P31275 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC12P31275 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC12P31275 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC12P31275 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC12P31275 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC12P31275 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HOXC12P31275 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXC12P31275 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.82□□□□□ -0.2
HOXC12P31275 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC12P31275 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.82□□□□□ -0.2
HOXC12P31275 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC12P31275 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXC12P31275 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.82□□□□□ -0.2
HOXC12P31275 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
HOXC12P31275 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
HOXC12P31275 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 REXO1L6P-201ENST00000603433 1515 ntBASIC13.81□□□□□ -0.2
HOXC12P31275 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
HOXC12P31275 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 AC092053.3-201ENST00000641308 4975 ntBASIC13.81□□□□□ -0.2
HOXC12P31275 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HOXC12P31275 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
HOXC12P31275 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HOXC12P31275 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.81□□□□□ -0.2
HOXC12P31275 FAM86MP-201ENST00000340703 885 ntBASIC13.81□□□□□ -0.2
HOXC12P31275 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.81□□□□□ -0.2
HOXC12P31275 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.81□□□□□ -0.2
HOXC12P31275 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HOXC12P31275 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.81□□□□□ -0.2
HOXC12P31275 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.81□□□□□ -0.2
HOXC12P31275 SPDYE18-201ENST00000510091 1050 ntBASIC13.81□□□□□ -0.2
HOXC12P31275 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.81□□□□□ -0.2
HOXC12P31275 AC092552.1-201ENST00000547243 906 ntBASIC13.81□□□□□ -0.2
HOXC12P31275 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.81□□□□□ -0.2
HOXC12P31275 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.81□□□□□ -0.2
HOXC12P31275 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.81□□□□□ -0.2
HOXC12P31275 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
HOXC12P31275 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
HOXC12P31275 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HOXC12P31275 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HOXC12P31275 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 AC018892.3-201ENST00000623986 2499 ntBASIC13.81□□□□□ -0.2
HOXC12P31275 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.81□□□□□ -0.2
HOXC12P31275 AL603832.2-201ENST00000566195 2125 ntBASIC13.81□□□□□ -0.2
HOXC12P31275 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.81□□□□□ -0.2
HOXC12P31275 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXC12P31275 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
HOXC12P31275 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
HOXC12P31275 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.8□□□□□ -0.2
HOXC12P31275 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HOXC12P31275 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.8□□□□□ -0.2
HOXC12P31275 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
HOXC12P31275 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 MIR193BHG-211ENST00000641433 5365 ntBASIC13.8□□□□□ -0.2
HOXC12P31275 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.8□□□□□ -0.2
HOXC12P31275 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.8□□□□□ -0.2
HOXC12P31275 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.8□□□□□ -0.2
HOXC12P31275 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
HOXC12P31275 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HOXC12P31275 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.8□□□□□ -0.2
HOXC12P31275 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.8□□□□□ -0.2
HOXC12P31275 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
HOXC12P31275 AC234783.1-201ENST00000441761 496 ntBASIC13.8□□□□□ -0.2
HOXC12P31275 KRT223P-202ENST00000449164 1292 ntBASIC13.8□□□□□ -0.2
HOXC12P31275 MYCLP2-201ENST00000449268 967 ntBASIC13.8□□□□□ -0.2
HOXC12P31275 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.8□□□□□ -0.2
HOXC12P31275 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.8□□□□□ -0.2
HOXC12P31275 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.8□□□□□ -0.2
HOXC12P31275 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.8□□□□□ -0.2
HOXC12P31275 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms