Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
GDF1P27539 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.06□□□□□ -0.16
GDF1P27539 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
GDF1P27539 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.06□□□□□ -0.16
GDF1P27539 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
GDF1P27539 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GDF1P27539 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.05□□□□□ -0.16
GDF1P27539 AC084364.1-201ENST00000551967 1556 ntBASIC14.05□□□□□ -0.16
GDF1P27539 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.05□□□□□ -0.16
GDF1P27539 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
GDF1P27539 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
GDF1P27539 PCDHA3-202ENST00000532566 4594 ntBASIC14.05□□□□□ -0.16
GDF1P27539 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.05□□□□□ -0.16
GDF1P27539 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.05□□□□□ -0.16
GDF1P27539 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
GDF1P27539 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
GDF1P27539 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.05□□□□□ -0.16
GDF1P27539 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
GDF1P27539 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.05□□□□□ -0.16
GDF1P27539 ARSEP1-201ENST00000420443 635 ntBASIC14.05□□□□□ -0.16
GDF1P27539 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.05□□□□□ -0.16
GDF1P27539 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.05□□□□□ -0.16
GDF1P27539 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.05□□□□□ -0.16
GDF1P27539 ACA64.2-201ENST00000459014 129 ntBASIC14.05□□□□□ -0.16
GDF1P27539 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.05□□□□□ -0.16
GDF1P27539 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.05□□□□□ -0.16
GDF1P27539 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
GDF1P27539 SLC25A47P1-201ENST00000531577 414 ntBASIC14.05□□□□□ -0.16
GDF1P27539 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.05□□□□□ -0.16
GDF1P27539 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.05□□□□□ -0.16
GDF1P27539 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.05□□□□□ -0.16
GDF1P27539 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.05□□□□□ -0.16
GDF1P27539 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.05□□□□□ -0.16
GDF1P27539 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.05□□□□□ -0.16
GDF1P27539 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.05□□□□□ -0.16
GDF1P27539 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 BTNL10-201ENST00000595971 695 ntBASIC14.05□□□□□ -0.16
GDF1P27539 RPSAP52-203ENST00000622976 1023 ntBASIC14.05□□□□□ -0.16
GDF1P27539 AC005252.2-201ENST00000624630 1141 ntBASIC14.05□□□□□ -0.16
GDF1P27539 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.05□□□□□ -0.16
GDF1P27539 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
GDF1P27539 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.05□□□□□ -0.16
GDF1P27539 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
GDF1P27539 AC018665.1-201ENST00000622927 1362 ntBASIC14.05□□□□□ -0.16
GDF1P27539 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
GDF1P27539 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 AC008741.2-201ENST00000612792 3115 ntBASIC14.05□□□□□ -0.16
GDF1P27539 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.05□□□□□ -0.16
GDF1P27539 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.05□□□□□ -0.16
GDF1P27539 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
GDF1P27539 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.05□□□□□ -0.16
GDF1P27539 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.05□□□□□ -0.16
GDF1P27539 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GDF1P27539 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
GDF1P27539 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.04□□□□□ -0.16
GDF1P27539 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
GDF1P27539 AL161772.1-201ENST00000610494 4412 ntBASIC14.04□□□□□ -0.16
GDF1P27539 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.04□□□□□ -0.16
GDF1P27539 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.04□□□□□ -0.16
GDF1P27539 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
GDF1P27539 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
GDF1P27539 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
GDF1P27539 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
GDF1P27539 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms