Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COL8A2P25067 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
COL8A2P25067 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COL8A2P25067 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
COL8A2P25067 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
COL8A2P25067 AC013268.4-201ENST00000637413 2228 ntBASIC13.11□□□□□ -0.31
COL8A2P25067 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
COL8A2P25067 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
COL8A2P25067 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
COL8A2P25067 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
COL8A2P25067 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.1□□□□□ -0.31
COL8A2P25067 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.1□□□□□ -0.31
COL8A2P25067 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.1□□□□□ -0.31
COL8A2P25067 AC018665.1-201ENST00000622927 1362 ntBASIC13.1□□□□□ -0.31
COL8A2P25067 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.1□□□□□ -0.31
COL8A2P25067 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
COL8A2P25067 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
COL8A2P25067 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
COL8A2P25067 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.1□□□□□ -0.31
COL8A2P25067 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.1□□□□□ -0.31
COL8A2P25067 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
COL8A2P25067 AC234783.1-201ENST00000441761 496 ntBASIC13.1□□□□□ -0.31
COL8A2P25067 BCRP2-202ENST00000447763 634 ntBASIC13.1□□□□□ -0.31
COL8A2P25067 AC093433.1-201ENST00000458048 571 ntBASIC13.1□□□□□ -0.31
COL8A2P25067 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.1□□□□□ -0.31
COL8A2P25067 BCRP6-201ENST00000510112 632 ntBASIC13.1□□□□□ -0.31
COL8A2P25067 BCRP7-201ENST00000511549 544 ntBASIC13.1□□□□□ -0.31
COL8A2P25067 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.1□□□□□ -0.31
COL8A2P25067 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.1□□□□□ -0.31
COL8A2P25067 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
COL8A2P25067 PTP4A1P2-201ENST00000546033 454 ntBASIC13.1□□□□□ -0.31
COL8A2P25067 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.1□□□□□ -0.31
COL8A2P25067 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.1□□□□□ -0.31
COL8A2P25067 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.1□□□□□ -0.31
COL8A2P25067 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.1□□□□□ -0.31
COL8A2P25067 AC233724.13-201ENST00000598383 410 ntBASIC13.1□□□□□ -0.31
COL8A2P25067 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.1□□□□□ -0.31
COL8A2P25067 MIR6775-201ENST00000617557 69 ntBASIC13.1□□□□□ -0.31
COL8A2P25067 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.1□□□□□ -0.31
COL8A2P25067 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.1□□□□□ -0.31
COL8A2P25067 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.1□□□□□ -0.31
COL8A2P25067 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.1□□□□□ -0.31
COL8A2P25067 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.1□□□□□ -0.31
COL8A2P25067 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
COL8A2P25067 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
COL8A2P25067 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.09□□□□□ -0.31
COL8A2P25067 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.09□□□□□ -0.31
COL8A2P25067 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.09□□□□□ -0.31
COL8A2P25067 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COL8A2P25067 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
COL8A2P25067 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.09□□□□□ -0.31
COL8A2P25067 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
COL8A2P25067 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COL8A2P25067 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
COL8A2P25067 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COL8A2P25067 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
COL8A2P25067 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
COL8A2P25067 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COL8A2P25067 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COL8A2P25067 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.09□□□□□ -0.31
COL8A2P25067 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.09□□□□□ -0.31
COL8A2P25067 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
COL8A2P25067 MIR1909-201ENST00000411312 80 ntBASIC13.09□□□□□ -0.31
COL8A2P25067 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
COL8A2P25067 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.09□□□□□ -0.31
COL8A2P25067 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.09□□□□□ -0.31
COL8A2P25067 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.09□□□□□ -0.31
COL8A2P25067 AC007274.1-201ENST00000439805 662 ntBASIC13.09□□□□□ -0.31
COL8A2P25067 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.09□□□□□ -0.31
COL8A2P25067 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.09□□□□□ -0.31
COL8A2P25067 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.09□□□□□ -0.31
COL8A2P25067 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.09□□□□□ -0.31
COL8A2P25067 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.09□□□□□ -0.31
COL8A2P25067 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
COL8A2P25067 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.09□□□□□ -0.31
COL8A2P25067 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms