Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.56□□□□□ -0.08
CHMP24386 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CHMP24386 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.56□□□□□ -0.08
CHMP24386 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CHMP24386 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CHMP24386 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.56□□□□□ -0.08
CHMP24386 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.56□□□□□ -0.08
CHMP24386 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.56□□□□□ -0.08
CHMP24386 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.56□□□□□ -0.08
CHMP24386 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.56□□□□□ -0.08
CHMP24386 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.56□□□□□ -0.08
CHMP24386 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.56□□□□□ -0.08
CHMP24386 TEX28P1-201ENST00000613479 1221 ntBASIC14.56□□□□□ -0.08
CHMP24386 TEX28P2-201ENST00000617764 1221 ntBASIC14.56□□□□□ -0.08
CHMP24386 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.56□□□□□ -0.08
CHMP24386 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 KRT8P12-202ENST00000472924 1397 ntBASIC14.56□□□□□ -0.08
CHMP24386 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.56□□□□□ -0.08
CHMP24386 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.56□□□□□ -0.08
CHMP24386 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.56□□□□□ -0.08
CHMP24386 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHMP24386 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CHMP24386 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.56□□□□□ -0.08
CHMP24386 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CHMP24386 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.55□□□□□ -0.08
CHMP24386 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.55□□□□□ -0.08
CHMP24386 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CHMP24386 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.55□□□□□ -0.08
CHMP24386 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.55□□□□□ -0.08
CHMP24386 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CHMP24386 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.55□□□□□ -0.08
CHMP24386 AL390755.1-201ENST00000623716 2027 ntBASIC14.55□□□□□ -0.08
CHMP24386 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.55□□□□□ -0.08
CHMP24386 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CHMP24386 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CHMP24386 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 RPL37AP1-201ENST00000412502 279 ntBASIC14.55□□□□□ -0.08
CHMP24386 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.55□□□□□ -0.08
CHMP24386 SERBP1P3-201ENST00000459980 809 ntBASIC14.55□□□□□ -0.08
CHMP24386 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.55□□□□□ -0.08
CHMP24386 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CHMP24386 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.55□□□□□ -0.08
CHMP24386 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.55□□□□□ -0.08
CHMP24386 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.55□□□□□ -0.08
CHMP24386 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.55□□□□□ -0.08
CHMP24386 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.55□□□□□ -0.08
CHMP24386 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 AC087499.5-201ENST00000452760 1342 ntBASIC14.55□□□□□ -0.08
CHMP24386 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CHMP24386 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CHMP24386 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CHMP24386 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.55□□□□□ -0.08
CHMP24386 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
CHMP24386 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CHMP24386 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.55□□□□□ -0.08
CHMP24386 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHMP24386 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms