Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX1P22670 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFX1P22670 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.91■□□□□ 0.3
RFX1P22670 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RFX1P22670 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX1P22670 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RFX1P22670 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.91■□□□□ 0.3
RFX1P22670 LINC00554-201ENST00000564841 3011 ntBASIC16.91■□□□□ 0.3
RFX1P22670 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX1P22670 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RFX1P22670 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX1P22670 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX1P22670 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX1P22670 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.9■□□□□ 0.3
RFX1P22670 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.9■□□□□ 0.3
RFX1P22670 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX1P22670 AC084364.1-201ENST00000551967 1556 ntBASIC16.9■□□□□ 0.3
RFX1P22670 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX1P22670 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX1P22670 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX1P22670 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.9■□□□□ 0.3
RFX1P22670 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX1P22670 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RFX1P22670 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.9■□□□□ 0.3
RFX1P22670 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.9■□□□□ 0.3
RFX1P22670 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RFX1P22670 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX1P22670 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.9■□□□□ 0.3
RFX1P22670 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
RFX1P22670 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RFX1P22670 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.9■□□□□ 0.3
RFX1P22670 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RFX1P22670 WASH4P-201ENST00000564273 1246 ntBASIC16.9■□□□□ 0.3
RFX1P22670 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.9■□□□□ 0.3
RFX1P22670 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.9■□□□□ 0.3
RFX1P22670 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX1P22670 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.9■□□□□ 0.3
RFX1P22670 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.9■□□□□ 0.3
RFX1P22670 AL033527.5-202ENST00000641632 1098 ntBASIC16.9■□□□□ 0.3
RFX1P22670 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX1P22670 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX1P22670 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX1P22670 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX1P22670 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
RFX1P22670 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX1P22670 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX1P22670 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.9■□□□□ 0.3
RFX1P22670 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX1P22670 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.9■□□□□ 0.3
RFX1P22670 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RFX1P22670 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX1P22670 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX1P22670 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RFX1P22670 AC148477.4-201ENST00000613430 1793 ntBASIC16.89■□□□□ 0.3
RFX1P22670 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.89■□□□□ 0.3
RFX1P22670 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.89■□□□□ 0.3
RFX1P22670 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RFX1P22670 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RFX1P22670 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX1P22670 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX1P22670 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RFX1P22670 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.89■□□□□ 0.29
RFX1P22670 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.89■□□□□ 0.29
RFX1P22670 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX1P22670 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX1P22670 AC068587.6-202ENST00000641839 5619 ntBASIC16.89■□□□□ 0.29
RFX1P22670 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX1P22670 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX1P22670 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFX1P22670 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.89■□□□□ 0.29
RFX1P22670 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX1P22670 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX1P22670 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX1P22670 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFX1P22670 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.89■□□□□ 0.29
RFX1P22670 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFX1P22670 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
RFX1P22670 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFX1P22670 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.89■□□□□ 0.29
RFX1P22670 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.89■□□□□ 0.29
RFX1P22670 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.89■□□□□ 0.29
RFX1P22670 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.89■□□□□ 0.29
RFX1P22670 FAM8A2P-201ENST00000528813 1142 ntBASIC16.89■□□□□ 0.29
RFX1P22670 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
RFX1P22670 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
RFX1P22670 AC106886.1-201ENST00000568660 600 ntBASIC16.89■□□□□ 0.29
RFX1P22670 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.89■□□□□ 0.29
RFX1P22670 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.89■□□□□ 0.29
RFX1P22670 AC133552.6-201ENST00000613406 534 ntBASIC16.89■□□□□ 0.29
RFX1P22670 AC244517.3-201ENST00000616254 1235 ntBASIC16.89■□□□□ 0.29
RFX1P22670 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RFX1P22670 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RFX1P22670 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RFX1P22670 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.89■□□□□ 0.29
RFX1P22670 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RFX1P22670 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX1P22670 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
RFX1P22670 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX1P22670 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX1P22670 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms