Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
CCL1P22362 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL1P22362 TSEN15P1-201ENST00000423257 515 ntBASIC13.33□□□□□ -0.28
CCL1P22362 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL1P22362 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL1P22362 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CCL1P22362 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CCL1P22362 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL1P22362 AC092865.5-201ENST00000545435 363 ntBASIC13.33□□□□□ -0.28
CCL1P22362 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CCL1P22362 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL1P22362 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCL1P22362 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL1P22362 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL1P22362 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
CCL1P22362 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL1P22362 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CCL1P22362 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL1P22362 Z92544.3-201ENST00000624747 417 ntBASIC13.33□□□□□ -0.28
CCL1P22362 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.33□□□□□ -0.28
CCL1P22362 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL1P22362 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL1P22362 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL1P22362 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL1P22362 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL1P22362 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
CCL1P22362 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CCL1P22362 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL1P22362 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL1P22362 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL1P22362 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.33□□□□□ -0.28
CCL1P22362 TUBB3P1-201ENST00000405796 1332 ntBASIC13.33□□□□□ -0.28
CCL1P22362 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CCL1P22362 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL1P22362 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL1P22362 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CCL1P22362 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL1P22362 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL1P22362 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CCL1P22362 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL1P22362 AC140479.7-201ENST00000636301 2332 ntBASIC13.33□□□□□ -0.28
CCL1P22362 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL1P22362 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.33□□□□□ -0.28
CCL1P22362 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL1P22362 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL1P22362 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL1P22362 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL1P22362 AC005912.2-201ENST00000619492 2400 ntBASIC13.32□□□□□ -0.28
CCL1P22362 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CCL1P22362 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL1P22362 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL1P22362 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL1P22362 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL1P22362 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL1P22362 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL1P22362 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL1P22362 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.32□□□□□ -0.28
CCL1P22362 KLF2P3-201ENST00000451977 1087 ntBASIC13.32□□□□□ -0.28
CCL1P22362 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL1P22362 AC125807.1-201ENST00000483097 614 ntBASIC13.32□□□□□ -0.28
CCL1P22362 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.32□□□□□ -0.28
CCL1P22362 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL1P22362 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL1P22362 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL1P22362 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.32□□□□□ -0.28
CCL1P22362 AC140878.1-201ENST00000565277 250 ntBASIC13.32□□□□□ -0.28
CCL1P22362 AC092337.1-201ENST00000568699 1129 ntBASIC13.32□□□□□ -0.28
CCL1P22362 SAMD11P1-201ENST00000571429 661 ntBASIC13.32□□□□□ -0.28
CCL1P22362 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL1P22362 AL844908.2-201ENST00000609461 460 ntBASIC13.32□□□□□ -0.28
CCL1P22362 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.32□□□□□ -0.28
CCL1P22362 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL1P22362 AC004461.2-201ENST00000629517 803 ntBASIC13.32□□□□□ -0.28
CCL1P22362 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL1P22362 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL1P22362 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.32□□□□□ -0.28
CCL1P22362 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL1P22362 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CCL1P22362 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CCL1P22362 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CCL1P22362 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL1P22362 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL1P22362 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CCL1P22362 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CCL1P22362 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL1P22362 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.32□□□□□ -0.28
CCL1P22362 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CCL1P22362 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.31□□□□□ -0.28
CCL1P22362 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL1P22362 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL1P22362 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.31□□□□□ -0.28
CCL1P22362 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms