Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGA1P17096 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA1P17096 AC015818.8-201ENST00000587907 1519 ntBASIC15.91■□□□□ 0.14
HMGA1P17096 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
HMGA1P17096 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HMGA1P17096 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA1P17096 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGA1P17096 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGA1P17096 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGA1P17096 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HMGA1P17096 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA1P17096 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA1P17096 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.91■□□□□ 0.14
HMGA1P17096 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGA1P17096 AP006547.1-201ENST00000563435 692 ntBASIC15.91■□□□□ 0.14
HMGA1P17096 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.91■□□□□ 0.14
HMGA1P17096 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA1P17096 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA1P17096 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA1P17096 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
HMGA1P17096 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA1P17096 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGA1P17096 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA1P17096 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGA1P17096 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
HMGA1P17096 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HMGA1P17096 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HMGA1P17096 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HMGA1P17096 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HMGA1P17096 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HMGA1P17096 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA1P17096 REXO1L4P-201ENST00000605109 1937 ntBASIC15.9■□□□□ 0.14
HMGA1P17096 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA1P17096 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.9■□□□□ 0.14
HMGA1P17096 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.9■□□□□ 0.14
HMGA1P17096 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA1P17096 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA1P17096 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA1P17096 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA1P17096 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
HMGA1P17096 BTBD6P1-201ENST00000412176 1267 ntBASIC15.9■□□□□ 0.14
HMGA1P17096 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.9■□□□□ 0.14
HMGA1P17096 AC007969.1-201ENST00000433675 447 ntBASIC15.9■□□□□ 0.14
HMGA1P17096 COX5BP1-201ENST00000507622 393 ntBASIC15.9■□□□□ 0.14
HMGA1P17096 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA1P17096 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.9■□□□□ 0.14
HMGA1P17096 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
HMGA1P17096 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
HMGA1P17096 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.9■□□□□ 0.14
HMGA1P17096 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.9■□□□□ 0.14
HMGA1P17096 AL118558.3-201ENST00000607414 1079 ntBASIC15.9■□□□□ 0.14
HMGA1P17096 AC244093.1-201ENST00000610837 814 ntBASIC15.9■□□□□ 0.14
HMGA1P17096 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA1P17096 AC005695.3-201ENST00000614522 232 ntBASIC15.9■□□□□ 0.14
HMGA1P17096 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.9■□□□□ 0.14
HMGA1P17096 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HMGA1P17096 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HMGA1P17096 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA1P17096 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HMGA1P17096 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA1P17096 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA1P17096 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA1P17096 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.9■□□□□ 0.14
HMGA1P17096 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HMGA1P17096 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA1P17096 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA1P17096 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA1P17096 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HMGA1P17096 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA1P17096 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HMGA1P17096 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA1P17096 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA1P17096 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HMGA1P17096 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA1P17096 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA1P17096 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA1P17096 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGA1P17096 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA1P17096 AL023775.1-201ENST00000454907 1746 ntBASIC15.89■□□□□ 0.13
HMGA1P17096 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA1P17096 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGA1P17096 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGA1P17096 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGA1P17096 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA1P17096 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGA1P17096 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA1P17096 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA1P17096 MIR1247-201ENST00000408206 136 ntBASIC15.89■□□□□ 0.13
HMGA1P17096 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.89■□□□□ 0.13
HMGA1P17096 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HMGA1P17096 AC099548.2-209ENST00000480264 625 ntBASIC15.89■□□□□ 0.13
HMGA1P17096 AC026434.2-201ENST00000506094 1078 ntBASIC15.89■□□□□ 0.13
HMGA1P17096 AL391280.1-201ENST00000506969 1062 ntBASIC15.89■□□□□ 0.13
HMGA1P17096 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
HMGA1P17096 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
HMGA1P17096 AC106820.3-201ENST00000561653 397 ntBASIC15.89■□□□□ 0.13
HMGA1P17096 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGA1P17096 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGA1P17096 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.89■□□□□ 0.13
HMGA1P17096 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms