Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.7□□□□□ -0.38
DEFA4P12838 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.7□□□□□ -0.38
DEFA4P12838 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.7□□□□□ -0.38
DEFA4P12838 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.7□□□□□ -0.38
DEFA4P12838 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
DEFA4P12838 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.7□□□□□ -0.38
DEFA4P12838 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.7□□□□□ -0.38
DEFA4P12838 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.7□□□□□ -0.38
DEFA4P12838 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.7□□□□□ -0.38
DEFA4P12838 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.7□□□□□ -0.38
DEFA4P12838 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.7□□□□□ -0.38
DEFA4P12838 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.7□□□□□ -0.38
DEFA4P12838 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
DEFA4P12838 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
DEFA4P12838 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.7□□□□□ -0.38
DEFA4P12838 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.7□□□□□ -0.38
DEFA4P12838 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.7□□□□□ -0.38
DEFA4P12838 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.7□□□□□ -0.38
DEFA4P12838 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
DEFA4P12838 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
DEFA4P12838 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.7□□□□□ -0.38
DEFA4P12838 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.7□□□□□ -0.38
DEFA4P12838 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.7□□□□□ -0.38
DEFA4P12838 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
DEFA4P12838 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.69□□□□□ -0.38
DEFA4P12838 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
DEFA4P12838 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
DEFA4P12838 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.69□□□□□ -0.38
DEFA4P12838 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
DEFA4P12838 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
DEFA4P12838 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.69□□□□□ -0.38
DEFA4P12838 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.69□□□□□ -0.38
DEFA4P12838 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.69□□□□□ -0.38
DEFA4P12838 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.69□□□□□ -0.38
DEFA4P12838 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
DEFA4P12838 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
DEFA4P12838 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.69□□□□□ -0.38
DEFA4P12838 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 HLA-H-201ENST00000383620 1096 ntBASIC12.69□□□□□ -0.38
DEFA4P12838 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.69□□□□□ -0.38
DEFA4P12838 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.69□□□□□ -0.38
DEFA4P12838 HTR5BP-201ENST00000430851 1154 ntBASIC12.69□□□□□ -0.38
DEFA4P12838 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.69□□□□□ -0.38
DEFA4P12838 AL592309.1-201ENST00000443127 649 ntBASIC12.69□□□□□ -0.38
DEFA4P12838 CEND1P1-201ENST00000451006 455 ntBASIC12.69□□□□□ -0.38
DEFA4P12838 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.69□□□□□ -0.38
DEFA4P12838 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.69□□□□□ -0.38
DEFA4P12838 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.69□□□□□ -0.38
DEFA4P12838 AC079140.1-201ENST00000508039 487 ntBASIC12.69□□□□□ -0.38
DEFA4P12838 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.69□□□□□ -0.38
DEFA4P12838 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.69□□□□□ -0.38
DEFA4P12838 KRT8P23-201ENST00000560090 1207 ntBASIC12.69□□□□□ -0.38
DEFA4P12838 MIR3687-2-201ENST00000577708 61 ntBASIC12.69□□□□□ -0.38
DEFA4P12838 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.69□□□□□ -0.38
DEFA4P12838 AC026979.3-201ENST00000607315 403 ntBASIC12.69□□□□□ -0.38
DEFA4P12838 MIR3687-1-201ENST00000614492 61 ntBASIC12.69□□□□□ -0.38
DEFA4P12838 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
DEFA4P12838 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
DEFA4P12838 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
DEFA4P12838 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.69□□□□□ -0.38
DEFA4P12838 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
DEFA4P12838 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 MIR193BHG-211ENST00000641433 5365 ntBASIC12.69□□□□□ -0.38
DEFA4P12838 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
DEFA4P12838 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms